Pairwise Alignments

Query, 362 a.a., ABC transporter substrate-binding protein from Rahnella sp. WP5

Subject, 327 a.a., ABC transporter, substrate binding protein from Agrobacterium fabrum C58

 Score = 59.3 bits (142), Expect = 1e-13
 Identities = 67/280 (23%), Positives = 120/280 (42%), Gaps = 22/280 (7%)

Query: 36  VDAATKEGKVVVYSTTDTKAAGPLIQGFEATYPGIKVEYNDMNSTELYNRYISEQAAGGT 95
           +  A     +V+Y++   + A   + GF+A  PGI+VE+    + ++  + ++E  AG  
Sbjct: 17  IATAANAADLVLYTSQPNEDAQATVDGFKAANPGIEVEWVRDGTPKIMAKLMAEINAGNP 76

Query: 96  SGDVVWSSSMDTALKLATDYAQEYKSPEQGQLPKWAVWKDKAY-GTTYEPVVFIYNKRLI 154
             DV+          L  D     +  + GQL      + K    + Y+   F Y+ +LI
Sbjct: 77  VADVL----------LIADTVTLERMKQAGQLLAHKSAEAKNIDASLYDADGFYYSTKLI 126

Query: 155 PAGDVPDSHAALAKLIASQTEKFNKK-VTTYDIEKSGLGFMLSVQDFKADP----NYFKT 209
             G + ++ AA+         K   K + T     +    ++  Q   A      +Y++ 
Sbjct: 127 TTGIMYNTAAAMKPTSWKDLAKAEAKGLVTMPSPLTSGAALIHAQTLAAANGLGWDYYRQ 186

Query: 210 L-ADVAKGGLAVQSSTGTMMERVSSGENLIGFNILGSYAEARAKTDPSLGISYPKDYTLV 268
           L A+ A  G       G +++ V+SGE   G  +       +AK  P +   +P++    
Sbjct: 187 LKANEAIAG----GGNGAVLKSVASGEKAYGVVVDYMPIREKAKGAP-VEFVFPEEGVSA 241

Query: 269 LSRVSFISQESKNSNAAKLWLDYVLSEKGQSILANQADIP 308
           ++    I + +K+  AAK ++DYVLSEKGQ        IP
Sbjct: 242 VTEPVAIIKGTKHEEAAKKFVDYVLSEKGQQGFVKLGYIP 281