Pairwise Alignments

Query, 328 a.a., autoinducer 2 ABC transporter substrate-binding protein from Rahnella sp. WP5

Subject, 327 a.a., LacI family transcriptional regulator from Escherichia coli ECRC100

 Score =  375 bits (964), Expect = e-109
 Identities = 189/325 (58%), Positives = 242/325 (74%), Gaps = 2/325 (0%)

Query: 2   KFNLALVSACVVSACMLFTTPSFAAKPYDIAVVAKVTGIPWFTRMEVGVKEAAQKLDVNA 61
           +F + +VS+ ++ A ++ + P  AA+   +  ++KV G+PWF RM  GV EA +   VNA
Sbjct: 4   RFVINMVSSLLLGAALI-SAPLQAAEKV-VVNISKVDGMPWFNRMGEGVVEAGKAFGVNA 61

Query: 62  YQVGASTPDPAQQVKVIEDLIAKKVDAIIVVPNDAKVLEPVLKKARDQGIVVLTHESPDQ 121
            QVG S+ D  QQVK+IEDLIA+KV+AI +VPNDA VLEPV KKARD GIVVLT+ESP Q
Sbjct: 62  SQVGPSSTDAPQQVKIIEDLIARKVNAITIVPNDANVLEPVFKKARDAGIVVLTNESPGQ 121

Query: 122 QIGQWDIETIDSQKYAEANMDELAKDMGGKGGYAIYVGSLTVPLHNAWADAAIKYQKEKY 181
               WDIE ID++K+A   ++ +AK MGGKGGY IYVGSLTVP HN WAD  +KYQKE Y
Sbjct: 122 PSANWDIEIIDNEKFAAEYVEHMAKRMGGKGGYVIYVGSLTVPQHNLWADLLVKYQKEHY 181

Query: 182 PDMHEVTSRLPVAENIDKSYSTTLDLMKTYPDLKGIIGFGSLGPIGAGQAVQQKRAKNKI 241
           PDMHEVT R+PVAE++D S  TTLDLMKTYPDLK ++ FGS GPIGAG+AV++KRAKNK+
Sbjct: 182 PDMHEVTRRMPVAESVDVSRRTTLDLMKTYPDLKAVVSFGSNGPIGAGRAVKEKRAKNKV 241

Query: 242 AVVGIAMPAQAAPYLMRGDIKKVLLWDPKDAGYALVTVADQMLQGKEVTKDLSIDGLGKA 301
           AV G+ +P+QAA  +  GDI + + +DP  AGYAL  VA  +L+G+E+   L +  LGKA
Sbjct: 242 AVYGMMIPSQAASLIKSGDITEGITYDPASAGYALAAVASTLLKGEEIKPGLEMQNLGKA 301

Query: 302 DVDMDKHVIRFNKILEVTPENAKSL 326
           DVDMDK +IRF+K+L V  +N  SL
Sbjct: 302 DVDMDKRIIRFHKVLLVNKDNIDSL 326