Pairwise Alignments

Query, 401 a.a., multidrug efflux MFS transporter MdtH from Rahnella sp. WP5

Subject, 454 a.a., putative transport protein (VIMSS) from Escherichia coli BW25113

 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 82/343 (23%), Positives = 158/343 (46%), Gaps = 9/343 (2%)

Query: 20  ALVILGFFVVFPLISIRFVDQLGWAAMAVGLALGVRQLTQQGLGIFGGAIADRFGAKPMI 79
           +L +LG F+V P+++   +   G +   +G+A+G+  LTQ    I  G ++DR G KP+I
Sbjct: 22  SLRMLGMFMVLPVLTTYGMALQGASEALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLI 81

Query: 80  ITGMLLRAAGFATMAMADQPWILVCSCILSGLGGTLFDPPRTALVIKLTRPHERSRFFSL 139
           + G+ + AAG    A++D  W ++    L G G         AL+  LTR   R++  + 
Sbjct: 82  VGGLAVFAAGSVIAALSDSIWGIILGRALQGSGA--IAAAVMALLSDLTREQNRTKAMAF 139

Query: 140 MMMQDSAGAVIGALIGSWLL-QYDFHYVCWTGAAIFCLAAACNAWLLPAYRISTLRTP-- 196
           + +       I  ++G  +  +   H + W  A +     A   W++P      L     
Sbjct: 140 IGVSFGITFAIAMVLGPIITHKLGLHALFWMIAILATTGIALTIWVVPNSSTHVLNRESG 199

Query: 197 -MREGMMRVLRDRRFLAYVLTLTGYYMLTVQVMLMLPIAVNDVAGSPSAVKW-MYAIEAV 254
            ++    +VL + R L     +   ++L +   + LP  + D AG P+A  W +Y    +
Sbjct: 200 MVKGSFSKVLAEPRLLKLNFGIMCLHILLMSTFVALPGQLAD-AGFPAAEHWKVYLATML 258

Query: 255 LSLTLLYPIARWSEKRFRLEQRLMFGL-LIMTLSLLPVGLVTSINPLLLLIGFFYIGSII 313
           ++   + P   ++E + +++Q  +F + LI+   ++     T    L++ +  F++   +
Sbjct: 259 IAFGSVVPFIIYAEVKRKMKQVFVFCVGLIVVAEIVLWNAQTQFWQLVVGVQLFFVAFNL 318

Query: 314 AEPARETLGASLADARARGSYMGFSRLGLALGGVIGYTGGGWM 356
            E    +L +  + A  +G+ MG       LG  IG + GGW+
Sbjct: 319 MEALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGSLGGWI 361