Pairwise Alignments

Query, 412 a.a., IS110 family transposase from Rahnella sp. WP5

Subject, 410 a.a., Transposase and inactivated derivatives from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 52.0 bits (123), Expect = 3e-11
 Identities = 83/388 (21%), Positives = 150/388 (38%), Gaps = 40/388 (10%)

Query: 31  RVFHVIEHTAEALDAWLNALHKQVKGKIAIALELKKGPVVYALQKYPFITVFPVHALSLA 90
           R F       E L  WLN+L        +  +  K    VY + +  F  +       L 
Sbjct: 38  RTFGTFTAQIEELKTWLNSLSITHIAMESTGVYWKP---VYNILEEDFKII-------LV 87

Query: 91  RYRQAFSPSGAKDDPQDAELALELMLRYPQKIKAIEPDNADIRLLQQLVEQRRQLVEDKC 150
             R   +  G K D +D+E   +L+L    K   +  +   IR L+ L   +R+L+  + 
Sbjct: 88  NARHIKNVPGHKTDKKDSEWIAKLLLSGLLKGSFVPTEW--IRELRDLCRYKRKLIAQRV 145

Query: 151 RFVNRIINTLK----QYYPQPLEWFSHRGSLLLCELIIRWPSLQQLKRARRDTIRNFLNA 206
              NR+   L+    +      + F   G+L++  LI +    + L    + ++R     
Sbjct: 146 AQRNRLHKILEDANIKLASVASDIFGVTGTLIIDALIRKQDDPEYLANLAKGSLR----- 200

Query: 207 KGGRAIALTEQRVASIDNAIPLTTDPSVIEANALMATALATQIKVVSEIIKTYDERIETL 266
                     +++A +     L+    + E +  M   L   I  ++  I   + RIE  
Sbjct: 201 ----------KKMADLK----LSLQGRLTEHHRFMLATLRDSIDSINAQIGHIEARIERY 246

Query: 267 FDTLP-DAGLFKSLPGMGPCMGPRMLAALGDNRDRFNSAEEIQNYAGIAPVTERSGQKSW 325
              L  +  L +++PG+G      +LA  G++ + F   + + ++AG++P    S  K  
Sbjct: 247 AVELQQEVDLLQTIPGIGKETAMNILAESGNDMEVFPDHKHLASWAGVSPGNNESAGKKK 306

Query: 326 VHWRWQCAKFVRQTFVE--WAAKTVPSSYWARLYYQGLREKGKSHQSAIRALAFKWIRII 383
                   K+++   VE  WAA     +Y  R Y  G     +  + A+ A+A K +  +
Sbjct: 307 STRITHGNKYLKTALVEAAWAASHTKDTYLGRKY--GAIAARRGSKKALIAVAHKILTGL 364

Query: 384 YRCWKTRTQYDEAKYLLALEARHSPLLK 411
           Y   K +  Y E       E R    +K
Sbjct: 365 YYILKNKEPYLEPDDTTYQEKRKQAQIK 392