Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Rahnella sp. WP5

Subject, 930 a.a., DNA polymerase I (EC 2.7.7.7) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  791 bits (2042), Expect = 0.0
 Identities = 444/942 (47%), Positives = 605/942 (64%), Gaps = 29/942 (3%)

Query: 10  ILVDGSSYLYRAYHA-----FPPLTNSAGEPTGAMYGVLNMLRSLLLQYTPSHVAVVFDA 64
           +LVDGSSYLYRA+ A        L +     TGA+  ++NM++ L       + A VFDA
Sbjct: 1   LLVDGSSYLYRAFFAGGEAMSTTLPDGTVLKTGAIRIMINMMQKLRKDVRADYAACVFDA 60

Query: 65  KGKTFRDELFEQYKSHRPPMPDDLRSQIEPLHQMVKAMGLPLLVVSGVEADDVIGTLALE 124
           KG TFRD L+ +YK++R PMPDDLR+QI P+H++VK +G  +L V GVEADDVIGTLA  
Sbjct: 61  KGPTFRDALYPEYKANRSPMPDDLRAQIAPIHEVVKLLGWKVLDVPGVEADDVIGTLAHL 120

Query: 125 AELAGHAVLISTGDKDMAQLVTPGVTLINTMNNAILGPDEVVEKYGVPPSLIIDFLALMG 184
           A   G   +IS+GDKD++QLV   +T+I+TMN+       V  ++GVPPSL++D+  L+G
Sbjct: 121 AAQQGIDCIISSGDKDLSQLVNEHITVIDTMNDRRRDVAGVTAEFGVPPSLMLDYQTLVG 180

Query: 185 DSSDNIPGVPGVGEKTAQALLQGIGGLDALYADLDKVSTLSFRGAKTMAAKLADNKDVAY 244
           D  DN+PGVP VG KTA   LQ  G L+AL A   ++     +GA      L +  D   
Sbjct: 181 DQVDNVPGVPKVGPKTAVKWLQEYGSLEALVARAGEI-----KGAA--GENLRNALDWLP 233

Query: 245 LSYQLATIKTDVKLD------LTCAELTVSEPDADELHKLFGRYEFKRWLADVESGTWLS 298
              +L TIK D  L        +   +T++  D++ L      Y FK  +  +       
Sbjct: 234 KGRELLTIKIDCDLQDHIEGLPSLEAITIAGQDSEALKAFGETYGFKGLVKSLTQHDVPP 293

Query: 299 GKKSAGKAPAAAKKSAQAEDTTSAAVIEPN------QLSQDGYVTILDQATLDEWIGYLK 352
            +    K  AAAK   +A D +     EP+      + +   Y T+L     D W+  L+
Sbjct: 294 ERIEESKVKAAAK--GKAGDGSPGLFDEPDLSGSAERTTNLRYDTLLTWDQFDSWLQRLQ 351

Query: 353 GSEVFAFDTETDGLDTLTANLIGLSFATEAGKAAYLPVAHDYLDAPVQLDRDEVLKQLKP 412
            +E+ A DTET  LD + A ++G+SF+   G+AAY+P+ H   +AP QL  DEVL +LKP
Sbjct: 352 AAELVALDTETTSLDEMRAEIVGISFSVTPGEAAYIPLRHAGPEAPEQLPFDEVLAKLKP 411

Query: 413 ILEDEKQRKVGQNLKFDRGVLLRYDIELKGIAFDTMLESYVLDSVSGRHDMDSLADRYLG 472
            LED  + K+GQ++K+DR V   + IE++G   DTML+SYVL+ V   H + SLA+R+LG
Sbjct: 412 WLEDPAKHKLGQHMKYDRHVFANHGIEVQGYVHDTMLQSYVLE-VHKPHGLASLAERHLG 470

Query: 473 HKTVSFEEIAGKGKNQLTFNQIALEQAAPYAAEDADVTLQLHQALWPRIAESESLKTVFT 532
            + +++E++ GKG +Q+ F Q+ + +AA Y+ ED+D TL +H+ LWP++   E L+ ++ 
Sbjct: 471 RQGINYEDLCGKGAHQIPFAQVEVAKAAEYSCEDSDQTLDVHRVLWPQLQADEKLRFIY- 529

Query: 533 DIEMPLVPVLSHIERTGVLIDQNILAAHSKELAIRLNELENKAHELAEEPFNLSSTKQLQ 592
           ++E+     L  IER GVLID   LAA S EL  R+  LE +A+ +A +PFNL S KQL 
Sbjct: 530 ELEIASSEALYRIERNGVLIDAPTLAAQSHELGQRIVALEQEAYAIAGQPFNLGSPKQLG 589

Query: 593 AILYEKQKLPILKKTPGGAPSTNEEVLAELALNYPLPKVILEYRGLAKLKSTYTDKLPLM 652
            I ++K  LP++KKT  GA ST+EEVL +LA +YPLP  ILE+R LAKLK TYTDKL  +
Sbjct: 590 EIFFDKLGLPVIKKTATGARSTDEEVLEKLAEDYPLPAKILEHRSLAKLKGTYTDKLAQL 649

Query: 653 INPQSGRVHTSYHQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPKDYIILAADYS 712
             P++GRVHT Y QAV  TGRLSS+DPNLQNIP+R  EGRR+R+AF+AP   +I +ADYS
Sbjct: 650 ALPRTGRVHTHYAQAVAVTGRLSSNDPNLQNIPIRTPEGRRVREAFVAPAGSVIASADYS 709

Query: 713 QIELRIMAHLSKDEGLLKAFAEGKDIHRATAAEVFGTPLEKVSGEQRRSAKAINFGLIYG 772
           QIELRIMAH+S DE LL+AF EG D+HRATAAEVFG    +VS EQRR AK INFGLIYG
Sbjct: 710 QIELRIMAHISGDEALLRAFHEGLDVHRATAAEVFGVETAQVSSEQRRYAKVINFGLIYG 769

Query: 773 MSAFGLSRQLNIPRKESQRYMDLYFERYPGVLEYMERTRTQASEQGYVETLDGRRLYLPD 832
           M +FGL++ L I    ++ Y+  YFER+ GV  YM+ TR +A + GY+ET+ GRRL LPD
Sbjct: 770 MGSFGLAKALGIDNTAAKNYITRYFERFEGVKRYMDETRQRAKDMGYIETVFGRRLVLPD 829

Query: 833 IKSSNAMRRKGAERAAINAPMQGTAADIIKRAMISVADWLKQPDAPRARIIMQVHDELVF 892
           IK++   +    ER AINAPMQGTAAD+IK +M++V   L +      ++IMQVHDELVF
Sbjct: 830 IKNAKGAKLSALERQAINAPMQGTAADLIKLSMVAVQKALDE-QRRSTKMIMQVHDELVF 888

Query: 893 EVHKDDVEVASEKIRNLMEASMTLAVPLKVDVGTGENWDQAH 934
           EV + +V+    +I +LM     L VPL  +VG G NWD+AH
Sbjct: 889 EVPEGEVDWLKTEIPHLMAGVAALKVPLLAEVGVGPNWDKAH 930