Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Rahnella sp. WP5

Subject, 928 a.a., DNA polymerase I (EC 2.7.7.7) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 1420 bits (3675), Expect = 0.0
 Identities = 722/935 (77%), Positives = 804/935 (85%), Gaps = 8/935 (0%)

Query: 1   MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLLQYTPSHVAV 60
           M QI ENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSL++QY P+H AV
Sbjct: 1   MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYQPTHAAV 60

Query: 61  VFDAKGKTFRDELFEQYKSHRPPMPDDLRSQIEPLHQMVKAMGLPLLVVSGVEADDVIGT 120
           VFDAKGKTFRDELFE YKSHRPPMPDDLR+QIEPLH MVKAMGLPLL VSGVEADDVIGT
Sbjct: 61  VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120

Query: 121 LALEAELAGHAVLISTGDKDMAQLVTPGVTLINTMNNAILGPDEVVEKYGVPPSLIIDFL 180
           LA EAE  G  VLISTGDKDMAQLVTP +TLINTM N ILGPDEVV KYGVPP LIIDFL
Sbjct: 121 LAREAEKVGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPDEVVNKYGVPPELIIDFL 180

Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGIGGLDALYADLDKVSTLSFRGAKTMAAKLADNK 240
           ALMGDSSDNIPGVPGVGEKTAQALLQG+GGLD LYA+ +K++ L+FRGAKTMA KLA NK
Sbjct: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLTFRGAKTMAGKLAQNK 240

Query: 241 DVAYLSYQLATIKTDVKLDLTCAELTVSEPDADELHKLFGRYEFKRWLADVESGTWLSGK 300
           DVAYLSY+LATIKTDV+L+LTC +L V +P ADEL  LF +YEFKRW ADVESG WL  K
Sbjct: 241 DVAYLSYKLATIKTDVELELTCEQLEVQQPIADELLGLFKKYEFKRWTADVESGKWLQAK 300

Query: 301 KSAGKAPAAAKKSAQAEDTTSAAVIEPNQ-LSQDGYVTILDQATLDEWIGYLKGSEVFAF 359
              G  PAA  +     D + +   EP   LS + YVTILD  TL+ WI  LK + VFAF
Sbjct: 301 ---GAKPAAKPQETVVIDESPS---EPAAALSYENYVTILDDVTLESWIEKLKKAPVFAF 354

Query: 360 DTETDGLDTLTANLIGLSFATEAGKAAYLPVAHDYLDAPVQLDRDEVLKQLKPILEDEKQ 419
           DTETD LD + ANL+GLSFA E G AAY+PVAHDYLDAP Q+ R   L+ LKP+LEDEK 
Sbjct: 355 DTETDSLDNIAANLVGLSFAIEPGVAAYVPVAHDYLDAPDQISRQRALELLKPLLEDEKV 414

Query: 420 RKVGQNLKFDRGVLLRYDIELKGIAFDTMLESYVLDSVSGRHDMDSLADRYLGHKTVSFE 479
           RKVGQNLK+DRGVL  Y IEL+GIAFDTMLESY+L+SV+GRHDMDSL+DR+L HKT++FE
Sbjct: 415 RKVGQNLKYDRGVLQNYGIELRGIAFDTMLESYILNSVAGRHDMDSLSDRWLKHKTITFE 474

Query: 480 EIAGKGKNQLTFNQIALEQAAPYAAEDADVTLQLHQALWPRIAESESLKTVFTDIEMPLV 539
           +IAGKGKNQLTFNQIALE+A  YAAEDADVTLQLH  +WP + + +    VF +IEMPLV
Sbjct: 475 DIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPELQQHKGPLNVFENIEMPLV 534

Query: 540 PVLSHIERTGVLIDQNILAAHSKELAIRLNELENKAHELAEEPFNLSSTKQLQAILYEKQ 599
           PVLS +ER GV ID  +L  HS+E+ +RL ELE KAH++A E FNLSSTKQLQ IL+EKQ
Sbjct: 535 PVLSRVERNGVKIDPAVLHKHSEEITLRLAELEKKAHDIAGEAFNLSSTKQLQTILFEKQ 594

Query: 600 KLPILKKTPGGAPSTNEEVLAELALNYPLPKVILEYRGLAKLKSTYTDKLPLMINPQSGR 659
            +  LKKTPGGAPST+EEVL ELAL+YPLPKVILEYRGLAKLKSTYTDKLPLMINP++GR
Sbjct: 595 GIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGR 654

Query: 660 VHTSYHQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPKDYIILAADYSQIELRIM 719
           VHTSYHQAVTATGRLSS+DPNLQNIPVRN+EGRRIRQAFIAP+DY+I++ADYSQIELRIM
Sbjct: 655 VHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYLIVSADYSQIELRIM 714

Query: 720 AHLSKDEGLLKAFAEGKDIHRATAAEVFGTPLEKVSGEQRRSAKAINFGLIYGMSAFGLS 779
           AHLS+D+GLL AFAEGKDIHRATAAEVFG PL+ V+GEQRRSAKAINFGLIYGMSAFGLS
Sbjct: 715 AHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLDSVTGEQRRSAKAINFGLIYGMSAFGLS 774

Query: 780 RQLNIPRKESQRYMDLYFERYPGVLEYMERTRTQASEQGYVETLDGRRLYLPDIKSSNAM 839
           RQLNIPRKE+Q+YMDLYFERYPGVLEYMERTR QA EQGYVETL+GRRLYLPDIKSSNA 
Sbjct: 775 RQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLEGRRLYLPDIKSSNAA 834

Query: 840 RRKGAERAAINAPMQGTAADIIKRAMISVADWLKQPDAPRARIIMQVHDELVFEVHKDDV 899
           RR GAERAAINAPMQGTAADIIKRAMI+V  WL Q + PR R+IMQVHDELVFEVHKDD+
Sbjct: 835 RRAGAERAAINAPMQGTAADIIKRAMIAVDAWL-QAEQPRVRMIMQVHDELVFEVHKDDL 893

Query: 900 EVASEKIRNLMEASMTLAVPLKVDVGTGENWDQAH 934
           +  +++I  LME    + VPL V+VG+GENWDQAH
Sbjct: 894 DAVAKRIHQLMENCTRIDVPLLVEVGSGENWDQAH 928