Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Rahnella sp. WP5

Subject, 928 a.a., 5 from Escherichia coli BL21

 Score = 1417 bits (3669), Expect = 0.0
 Identities = 720/934 (77%), Positives = 801/934 (85%), Gaps = 6/934 (0%)

Query: 1   MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLLQYTPSHVAV 60
           M QI +NPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSL++QY P+H AV
Sbjct: 1   MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV 60

Query: 61  VFDAKGKTFRDELFEQYKSHRPPMPDDLRSQIEPLHQMVKAMGLPLLVVSGVEADDVIGT 120
           VFDAKGKTFRDELFE YKSHRPPMPDDLR+QIEPLH MVKAMGLPLL VSGVEADDVIGT
Sbjct: 61  VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT 120

Query: 121 LALEAELAGHAVLISTGDKDMAQLVTPGVTLINTMNNAILGPDEVVEKYGVPPSLIIDFL 180
           LA EAE AG  VLISTGDKDMAQLVTP +TLINTM N ILGP+EVV KYGVPP LIIDFL
Sbjct: 121 LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL 180

Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGIGGLDALYADLDKVSTLSFRGAKTMAAKLADNK 240
           ALMGDSSDNIPGVPGVGEKTAQALLQG+GGLD LYA+ +K++ LSFRGAKTMAAKL  NK
Sbjct: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK 240

Query: 241 DVAYLSYQLATIKTDVKLDLTCAELTVSEPDADELHKLFGRYEFKRWLADVESGTWLSGK 300
           +VAYLSYQLATIKTDV+L+LTC +L V +P A+EL  LF +YEFKRW ADVE+G WL  K
Sbjct: 241 EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK 300

Query: 301 KSAGKAPAAAKKSAQAEDTTSAAVIEPNQLSQDGYVTILDQATLDEWIGYLKGSEVFAFD 360
              G  PAA  +     D   A  +    +S D YVTILD+ TL  WI  L+ + VFAFD
Sbjct: 301 ---GAKPAAKPQETSVAD--EAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFD 355

Query: 361 TETDGLDTLTANLIGLSFATEAGKAAYLPVAHDYLDAPVQLDRDEVLKQLKPILEDEKQR 420
           TETD LD ++ANL+GLSFA E G AAY+PVAHDYLDAP Q+ R+  L+ LKP+LEDEK  
Sbjct: 356 TETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKAL 415

Query: 421 KVGQNLKFDRGVLLRYDIELKGIAFDTMLESYVLDSVSGRHDMDSLADRYLGHKTVSFEE 480
           KVGQNLK+DRG+L  Y IEL+GIAFDTMLESY+L+SV+GRHDMDSLA+R+L HKT++FEE
Sbjct: 416 KVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEE 475

Query: 481 IAGKGKNQLTFNQIALEQAAPYAAEDADVTLQLHQALWPRIAESESLKTVFTDIEMPLVP 540
           IAGKGKNQLTFNQIALE+A  YAAEDADVTLQLH  +WP + + +    VF +IEMPLVP
Sbjct: 476 IAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVP 535

Query: 541 VLSHIERTGVLIDQNILAAHSKELAIRLNELENKAHELAEEPFNLSSTKQLQAILYEKQK 600
           VLS IER GV ID  +L  HS+EL +RL ELE KAHE+A E FNLSSTKQLQ IL+EKQ 
Sbjct: 536 VLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG 595

Query: 601 LPILKKTPGGAPSTNEEVLAELALNYPLPKVILEYRGLAKLKSTYTDKLPLMINPQSGRV 660
           +  LKKTPGGAPST+EEVL ELAL+YPLPKVILEYRGLAKLKSTYTDKLPLMINP++GRV
Sbjct: 596 IKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRV 655

Query: 661 HTSYHQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPKDYIILAADYSQIELRIMA 720
           HTSYHQAVTATGRLSS+DPNLQNIPVRN+EGRRIRQAFIAP+DY+I++ADYSQIELRIMA
Sbjct: 656 HTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMA 715

Query: 721 HLSKDEGLLKAFAEGKDIHRATAAEVFGTPLEKVSGEQRRSAKAINFGLIYGMSAFGLSR 780
           HLS+D+GLL AFAEGKDIHRATAAEVFG PLE V+ EQRRSAKAINFGLIYGMSAFGL+R
Sbjct: 716 HLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLAR 775

Query: 781 QLNIPRKESQRYMDLYFERYPGVLEYMERTRTQASEQGYVETLDGRRLYLPDIKSSNAMR 840
           QLNIPRKE+Q+YMDLYFERYPGVLEYMERTR QA EQGYVETLDGRRLYLPDIKSSN  R
Sbjct: 776 QLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGAR 835

Query: 841 RKGAERAAINAPMQGTAADIIKRAMISVADWLKQPDAPRARIIMQVHDELVFEVHKDDVE 900
           R  AERAAINAPMQGTAADIIKRAMI+V  WL Q + PR R+IMQVHDELVFEVHKDDV+
Sbjct: 836 RAAAERAAINAPMQGTAADIIKRAMIAVDAWL-QAEQPRVRMIMQVHDELVFEVHKDDVD 894

Query: 901 VASEKIRNLMEASMTLAVPLKVDVGTGENWDQAH 934
             +++I  LME    L VPL V+VG+GENWDQAH
Sbjct: 895 AVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928