Pairwise Alignments

Query, 296 a.a., peptide ABC transporter permease SapC from Rahnella sp. WP5

Subject, 296 a.a., antimicrobial peptide transport ABC transporter permease from Escherichia coli BL21

 Score =  458 bits (1179), Expect = e-134
 Identities = 224/296 (75%), Positives = 255/296 (86%)

Query: 1   MPFDNVYREKQVPSPLRHTWGIFYRDTLSMIGFYGVLGLLLLCIFGHLLAPYALDQQFLG 60
           MP+D+VY EK+ P  LR  W  FY D  +M+G YG  GL +LCIFG   APY +DQQFLG
Sbjct: 1   MPYDSVYSEKRPPGTLRTAWRKFYSDASAMVGLYGCAGLAVLCIFGGWFAPYGIDQQFLG 60

Query: 61  YQLLPPSWSRYGNVSFFLGTDDLGRDLLSRMLTGAAPTIGGALVITLAASLCGVIIGVLA 120
           YQLLPPSWSRYG VSFFLGTDDLGRD+LSR+L+GAAPT+GGA V+TLAA++CG+++G  A
Sbjct: 61  YQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGAFVVTLAATICGLVLGTFA 120

Query: 121 GISRGLKSAILNHIFDTLLSIPSLLLAIVVVAFIGPKLEHAMLAVWLALLPRISRTIYSA 180
           G + GL+SA+LNHI DTLL+IPSLLLAI+VVAF GP L HAM AVWLALLPR+ R+IYS 
Sbjct: 121 GATHGLRSAVLNHILDTLLAIPSLLLAIIVVAFAGPSLSHAMFAVWLALLPRMVRSIYSM 180

Query: 181 VHDELEKEYVVAVRLDGASTWQILRYAVLPNIVAVLATEFTRALSMAILDIAALGFLDLG 240
           VHDELEKEYV+A RLDGAST  IL +AV+PNI A L TE TRALSMAILDIAALGFLDLG
Sbjct: 181 VHDELEKEYVIAARLDGASTLNILWFAVMPNITAGLVTEITRALSMAILDIAALGFLDLG 240

Query: 241 AQLPSPEWGAMLGDSLELVYVAPWTVMLPGAAILISVLLINLLGDGVRRAINAGVE 296
           AQLPSPEWGAMLGD+LEL+YVAPWTVMLPGAAI+ISVLL+NLLGDGVRRAI AGVE
Sbjct: 241 AQLPSPEWGAMLGDALELIYVAPWTVMLPGAAIMISVLLVNLLGDGVRRAIIAGVE 296