Pairwise Alignments

Query, 304 a.a., branched-chain amino acid ABC transporter permease from Rahnella sp. WP5

Subject, 304 a.a., branched-chain amino acid transporter permease subunit LivH from Pseudomonas simiae WCS417

 Score =  506 bits (1303), Expect = e-148
 Identities = 251/304 (82%), Positives = 282/304 (92%)

Query: 1   MDSFFLQQLFNGITLGAVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLCAIALALLSF 60
           MD  FLQQL NG+TLG+VYGLIAIGYTMVYGIIGMINFAHGEVYMISAYL AI+LALL++
Sbjct: 1   MDGIFLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAY 60

Query: 61  FGLHSFPLLILGTLVFTIVVTGVYGWAIERIAYKPLRNSTRLAPLISAIGMSLILQNYAQ 120
           FG+ SFPLLILGTL+FT+VVTGVYGW IER+AYKPLRNSTRLAPLISAIG+SLILQNYAQ
Sbjct: 61  FGIESFPLLILGTLIFTVVVTGVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQ 120

Query: 121 ISQGPRQQGIPTMLDGAFRFHIGESFVQMTYTKIFILVASLAGMLVLSWIISNTKLGRMC 180
           I+QG +QQGIPT+L GA+R  IG  FVQ+TYTK+FILVA+ AGM +L+++I  TKLGRMC
Sbjct: 121 IAQGAKQQGIPTLLAGAWRVDIGSGFVQLTYTKVFILVAAFAGMALLTYVIKYTKLGRMC 180

Query: 181 RAVQQDRKMASILGINTDRIISLVFMIGAAMAGLAGVLVTMNYGTFDFYAGFIIGIKAFT 240
           RA QQDRKMASILGINTDR+IS VF+IGAAMA LAGVL+T+NYGTFDFYAGFIIGIKAFT
Sbjct: 181 RATQQDRKMASILGINTDRVISYVFVIGAAMAALAGVLITLNYGTFDFYAGFIIGIKAFT 240

Query: 241 AAVLGGIGSLPGAMLGGLILGIAEAQFSGMVNSDYKDVFSFGLLVVILIFRPQGLLGRPV 300
           AAVLGGIGSLPGAMLGG+ILGI+E+ FSG++NSDYKDVFSF LLVVILIFRPQGLLGRP+
Sbjct: 241 AAVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVVILIFRPQGLLGRPL 300

Query: 301 VTKV 304
           V KV
Sbjct: 301 VAKV 304