Pairwise Alignments

Query, 304 a.a., branched-chain amino acid ABC transporter permease from Rahnella sp. WP5

Subject, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

 Score =  500 bits (1287), Expect = e-146
 Identities = 250/304 (82%), Positives = 280/304 (92%)

Query: 1   MDSFFLQQLFNGITLGAVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLCAIALALLSF 60
           MD  FLQQL NG+TLG+VYGLIAIGYTMVYGIIGMINFAHGEVYMISAYL AI+LALL++
Sbjct: 1   MDGIFLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAY 60

Query: 61  FGLHSFPLLILGTLVFTIVVTGVYGWAIERIAYKPLRNSTRLAPLISAIGMSLILQNYAQ 120
           FG+ SFPLL+LGTL+FTIVVTGVYG+ IERIAYKPLRNSTRLAPLISAIG+SLILQNYAQ
Sbjct: 61  FGVESFPLLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQ 120

Query: 121 ISQGPRQQGIPTMLDGAFRFHIGESFVQMTYTKIFILVASLAGMLVLSWIISNTKLGRMC 180
           ISQG RQQG+PT+L+GA R  +G  FVQ+TYTKIFILVA+  GM +L+++I  TKLGRMC
Sbjct: 121 ISQGARQQGVPTLLEGAMRVEVGSGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMC 180

Query: 181 RAVQQDRKMASILGINTDRIISLVFMIGAAMAGLAGVLVTMNYGTFDFYAGFIIGIKAFT 240
           RA QQDRKMASILGINTDR+IS VF+IGA MA LAGVL+TMNYGTFDFYAGFIIGIKAFT
Sbjct: 181 RATQQDRKMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYAGFIIGIKAFT 240

Query: 241 AAVLGGIGSLPGAMLGGLILGIAEAQFSGMVNSDYKDVFSFGLLVVILIFRPQGLLGRPV 300
           AAVLGGIGSLPGAMLGG+ILGI+E+ FSG++NSDYKDVFSF LLV+ILIFRPQGLLGRP+
Sbjct: 241 AAVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVMILIFRPQGLLGRPL 300

Query: 301 VTKV 304
           V KV
Sbjct: 301 VAKV 304