Pairwise Alignments

Query, 304 a.a., branched-chain amino acid ABC transporter permease from Rahnella sp. WP5

Subject, 307 a.a., branched chain amino acid transporter - permease subunit from Pseudomonas putida KT2440

 Score =  348 bits (892), Expect = e-100
 Identities = 175/301 (58%), Positives = 229/301 (76%), Gaps = 1/301 (0%)

Query: 5   FLQQLFNGITLGAVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLCAIALALLSFFGLH 64
           F QQL NG+T+G+ Y LIAIGYTMVYGIIGMINFAHGEVYMI +Y+  IALA L+  G+H
Sbjct: 7   FFQQLVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIALAGLAMMGIH 66

Query: 65  SFPLLILGTLVFTIVVTGVYGWAIERIAYKPLRNSTRLAPLISAIGMSLILQNYAQISQG 124
           S P+L+    V TI VT  YG++IER+AY+PLRNS RL PLISAIGMS+ LQN   +SQ 
Sbjct: 67  SLPILMTVAFVATIFVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNTVLLSQD 126

Query: 125 PRQQGIPTMLDGAFRFHIGESF-VQMTYTKIFILVASLAGMLVLSWIISNTKLGRMCRAV 183
            + + IP ++ G+F F  G +  V ++Y +I + V +L  M +L+  IS ++LGR CRA 
Sbjct: 127 SKDKSIPNLIPGSFSFGPGGAEEVLISYMQILVFVVTLVAMTLLTLFISRSRLGRACRAC 186

Query: 184 QQDRKMASILGINTDRIISLVFMIGAAMAGLAGVLVTMNYGTFDFYAGFIIGIKAFTAAV 243
            +D KMA++LGINT+ II+L F+IGAA+A +A VL++M YG  +  AGF++G+KAFTAAV
Sbjct: 187 AEDIKMANLLGINTNNIIALTFVIGAALAAVAAVLLSMQYGVINPNAGFLVGLKAFTAAV 246

Query: 244 LGGIGSLPGAMLGGLILGIAEAQFSGMVNSDYKDVFSFGLLVVILIFRPQGLLGRPVVTK 303
           LGGIGS+PGAMLGGL+LG+AEA  + +    YKDV +FGLLV++L+FRP G+LGRP V K
Sbjct: 247 LGGIGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGILGRPEVEK 306

Query: 304 V 304
           V
Sbjct: 307 V 307