Pairwise Alignments

Query, 304 a.a., branched-chain amino acid ABC transporter permease from Rahnella sp. WP5

Subject, 308 a.a., leucine/isoleucine/valine transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  330 bits (847), Expect = 2e-95
 Identities = 166/302 (54%), Positives = 221/302 (73%), Gaps = 1/302 (0%)

Query: 4   FFLQQLFNGITLGAVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLCAIALALLSFFGL 63
           +FLQQ+FNG+TLG+ Y LIAIGYTMVYGIIGMINFAHGEVYMI +Y+  + +A L   G+
Sbjct: 7   YFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGI 66

Query: 64  HSFPLLILGTLVFTIVVTGVYGWAIERIAYKPLRNSTRLAPLISAIGMSLILQNYAQISQ 123
            +  LL+    V  IV+   YGW+IER+AY+P+RNS RL  LISAIGMS+ LQNY  +++
Sbjct: 67  DTGWLLVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTE 126

Query: 124 GPRQQGIPTMLDGAFRFHIGESF-VQMTYTKIFILVASLAGMLVLSWIISNTKLGRMCRA 182
           G R   +P++ +G +     E+F   +T  +  I + +   ML L+  I  +++GR CRA
Sbjct: 127 GSRDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRACRA 186

Query: 183 VQQDRKMASILGINTDRIISLVFMIGAAMAGLAGVLVTMNYGTFDFYAGFIIGIKAFTAA 242
             +D KMAS+LGINTDR+I+L F+IGAAMA +AGVL+   YG  + Y GF+ G+KAFTAA
Sbjct: 187 CAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPYIGFMAGMKAFTAA 246

Query: 243 VLGGIGSLPGAMLGGLILGIAEAQFSGMVNSDYKDVFSFGLLVVILIFRPQGLLGRPVVT 302
           VLGGIGS+PGAM+GGLILGIAEA  S  ++++YKDV SF LL+++L+  P G+LGRP V 
Sbjct: 247 VLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSFALLILVLLVMPTGILGRPEVE 306

Query: 303 KV 304
           KV
Sbjct: 307 KV 308