Pairwise Alignments

Query, 610 a.a., ATP-dependent DNA helicase RecQ from Rahnella sp. WP5

Subject, 708 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas simiae WCS417

 Score =  548 bits (1413), Expect = e-160
 Identities = 284/595 (47%), Positives = 397/595 (66%), Gaps = 6/595 (1%)

Query: 11  ELAHQVLRDTFGYQQFRPGQQTIINTALSGRDCLVVMPTGGGKSLCYQIPALVMDGLTLV 70
           E A +VL+D FGY  FR  Q  II    SG D LV+MPTGGGKSLC+Q+PAL+ +GL +V
Sbjct: 3   EQAQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLAVV 62

Query: 71  VSPLISLMKDQVDQLMAAGVEAGCLNSTQTREQQLEVMAGCRAGRIKMLYIAPERLMMGD 130
           VSPLI+LM DQV  L   GV A  LNST + EQQ ++ A  + G +KMLY+APERL+   
Sbjct: 63  VSPLIALMDDQVATLEELGVAAASLNSTLSAEQQRDLAARIKRGEVKMLYLAPERLVQPR 122

Query: 131 FLEQLQQWNPAMLAVDEAHCISQWGHDFRPEYRALGQLKLRYPQLPVIALTATADEATRN 190
            L  LQ    A+ A+DEAHC+SQWGHDFR EY  LGQL   +P +P IALTATAD+ TR 
Sbjct: 123 MLAFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRTRE 182

Query: 191 DIVRLLELNDPLIQVSSFDRPNIRYTLVEKFKPLDQLIRFVQDQRGKSGIIYCNSRAKVE 250
           +IV  L L +    +SSFDR NI Y +V K +P  QL+ F+ ++R  +GI+YC SR KV+
Sbjct: 183 EIVERLHLQNAERFLSSFDRSNIFYRIVPKEQPRKQLLAFLSERRSDAGIVYCLSRKKVD 242

Query: 251 DTAARLQSRGLSVGAYHAGLDNDTRARVQEGFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
           + AA L  +G     YHAGL ND RA  Q+ F  ++  I+VAT+AFGMGI+K NVRFV H
Sbjct: 243 EVAAFLCEQGYPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKSNVRFVAH 302

Query: 311 FDIPRTIESYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCLEEKPAGAQ-QDVERHKLN 369
            D+P+++E+YYQETGRAGRDGLPA+A ++Y   D+  L++ L+      + + +E+HKL+
Sbjct: 303 MDLPKSLEAYYQETGRAGRDGLPADAWMVYGLQDVVMLKQMLQNSEGDERHKRLEQHKLD 362

Query: 370 AMNAFAEAQTCRRLVLLNYFGEGKQNACGNCDVCLDPPKRYDGLLDAQKALSVVARVGQR 429
           AM +  E   CRR  LL YF E     CG+CD C+D  + +D    A++ LS + R GQR
Sbjct: 363 AMLSLCEETRCRRQTLLAYFDEDMPEPCGHCDNCVDGVQTWDATEPARQGLSAIYRTGQR 422

Query: 430 FGLGYVVEVLRGSNNQRIREYGHDKLTVYGIGKEHSNEHWTSVVRQLIHLGLITQNIAMH 489
           +G+G++V+VL G +N+++R +GH+KL+VYG+GK  +   W S+ RQ++  GL+  +I   
Sbjct: 423 YGVGHLVDVLLGKDNEKVRSFGHEKLSVYGVGKARAEGEWRSLFRQMVARGLVDIDIEGF 482

Query: 490 SALQLTESARPVLRGEIPLQL---AVPRIQTLKIKSSASQKTYGGNYDRKLFAKLRKLRK 546
             L+L +S RP+L+GE+ L+L     P+       S ASQ   G   +R+ +  LR LR+
Sbjct: 483 GGLRLNDSCRPLLKGEVSLELRRDLKPQTTAKSSTSQASQLVRG--EEREQWEALRTLRR 540

Query: 547 SLADDNNVPPYVVFNDTTLLEMAEHLPVSASDLLDITGVGQRKLEKFGRPFMAMI 601
            LA +++VPPYV+F D+TLLEM    P S +++  ++GVG RKLE++G+ F+ ++
Sbjct: 541 KLAQEHSVPPYVIFPDSTLLEMLREQPTSMAEMARVSGVGARKLERYGQAFLEVL 595