Pairwise Alignments

Query, 610 a.a., ATP-dependent DNA helicase RecQ from Rahnella sp. WP5

Subject, 715 a.a., ATP-dependent DNA 3 from Pseudomonas putida KT2440

 Score =  563 bits (1451), Expect = e-165
 Identities = 293/603 (48%), Positives = 407/603 (67%), Gaps = 14/603 (2%)

Query: 11  ELAHQVLRDTFGYQQFRPGQQTIINTALSGRDCLVVMPTGGGKSLCYQIPALVMDGLTLV 70
           E A +VL+D FGY  FR  Q  II    +G D LV+MPTGGGKSLC+Q+P L+  GLT+V
Sbjct: 3   EQAQRVLKDIFGYDSFRGRQAAIIECVANGGDALVLMPTGGGKSLCFQVPGLLRPGLTVV 62

Query: 71  VSPLISLMKDQVDQLMAAGVEAGCLNSTQTREQQLEVMAGCRAGRIKMLYIAPERLMMGD 130
           VSPLI+LM DQV  L   GV A  LNST T EQQ E+    R G +KMLY+APERL+   
Sbjct: 63  VSPLIALMDDQVATLDELGVSAAALNSTLTAEQQRELAGRLRRGEVKMLYLAPERLVQPR 122

Query: 131 FLEQLQQWNPAMLAVDEAHCISQWGHDFRPEYRALGQLKLRYPQLPVIALTATADEATRN 190
            L+ L+  + ++ A+DEAHC+SQWGHDFRPEY  LGQL   +P +P IALTATAD  TR 
Sbjct: 123 MLDFLRDLDISLFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPHVPRIALTATADMRTRE 182

Query: 191 DIVRLLELNDPLIQVSSFDRPNIRYTLVEKFKPLDQLIRFVQDQRGKSGIIYCNSRAKVE 250
           +IV+ L L      +SSFDRPNI Y +V K  P  QL+ F+ ++RG +GI+YC SR KV+
Sbjct: 183 EIVQRLHLQGAERFLSSFDRPNIFYRIVPKEAPRKQLMAFLGERRGNAGIVYCLSRKKVD 242

Query: 251 DTAARLQSRGLSVGAYHAGLDNDTRARVQEGFQRDDLQIVVATVAFGMGINKPNVRFVVH 310
           +TAA L S+G     YHAGL  +TRA  Q  F  ++  I+VAT+AFGMGI+KPNVRFV H
Sbjct: 243 ETAAFLCSQGFPALPYHAGLAAETRAANQHRFLNEEGLIMVATIAFGMGIDKPNVRFVAH 302

Query: 311 FDIPRTIESYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCLEEKPAGAQ-QDVERHKLN 369
            D+P+++E+YYQETGRAGRDGLP++A + Y   DM  L++ L+      + + +E+HKL+
Sbjct: 303 LDLPKSLEAYYQETGRAGRDGLPSDAWMAYGLQDMVMLKQMLQNSEGDERHKRIEQHKLD 362

Query: 370 AMNAFAEAQTCRRLVLLNYFGEGKQNACGNCDVCLDPPKRYDGLLDAQKALSVVARVGQR 429
           AM A  E   CRR  LL YF E  +  CG+CD C+D  + +D    A++ALS V R GQR
Sbjct: 363 AMLALCEETRCRRQSLLAYFDEILEQPCGHCDNCVDNIQTWDATEPARQALSAVFRTGQR 422

Query: 430 FGLGYVVEVLRGSNNQRIREYGHDKLTVYGIGKEHSNEHWTSVVRQLIHLGLITQNIAMH 489
           +G+G++V+VL G + +++R +GH+KL+V+G+GK  +   W S+ RQL+  GL+  ++  +
Sbjct: 423 YGVGHLVDVLLGKDTEKVRNFGHEKLSVFGVGKGLAEVEWRSLFRQLVARGLVDIDLEGY 482

Query: 490 SALQLTESARPVLRGEIPLQLAVPRIQTLKIKSSASQKTYGGN---------YDRKLFAK 540
             L+L++S RP+LRGE+ LQL     + LK +++A   +  G           +R L+  
Sbjct: 483 GGLRLSDSCRPLLRGEVTLQLR----RDLKPQTTAKTSSSSGGSPASQLVRAEERDLWEA 538

Query: 541 LRKLRKSLADDNNVPPYVVFNDTTLLEMAEHLPVSASDLLDITGVGQRKLEKFGRPFMAM 600
           LR LR+ LA++++VPPYV+F D+TLLEM    PVS SD+  ++GVG RKLE++G+ F+ +
Sbjct: 539 LRTLRRKLAEEHSVPPYVIFPDSTLLEMLRSQPVSLSDMAQVSGVGARKLERYGQAFLEV 598

Query: 601 IRD 603
           + +
Sbjct: 599 LNN 601