Pairwise Alignments

Query, 610 a.a., ATP-dependent DNA helicase RecQ from Rahnella sp. WP5

Subject, 637 a.a., ATP-dependent DNA helicase RecQ from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  493 bits (1269), Expect = e-143
 Identities = 274/614 (44%), Positives = 379/614 (61%), Gaps = 29/614 (4%)

Query: 16  VLRDTFGYQQFRPGQQTIINTALSGRDCLVVMPTGGGKSLCYQIPALVMD----GLTLVV 71
           VL + FGY  FR  Q  I++   +G D LV+MPTGGGKSLCYQ+PA+V +    GLT+VV
Sbjct: 21  VLHEVFGYDAFRGPQADIVSHVGAGGDALVLMPTGGGKSLCYQVPAIVRERTGQGLTVVV 80

Query: 72  SPLISLMKDQVDQLMAAGVEAGCLNSTQTREQQLEVMAGCRAGRIKMLYIAPERLMMGDF 131
           SPLI+LM DQV  L+ AGV A  LNS+ + E   +V      G + +LY APERL    F
Sbjct: 81  SPLIALMHDQVGALIEAGVAAAFLNSSLSLEDAQQVEKQMLRGELTLLYAAPERLTTPRF 140

Query: 132 LEQLQQWNP----AMLAVDEAHCISQWGHDFRPEYRALGQLKLRYPQLPVIALTATADEA 187
           L  L   +     ++ A+DEAHC+SQWGHDFRPEYRAL  L  RY  +P +ALTATAD+ 
Sbjct: 141 LALLDSLHERGKLSLFAIDEAHCVSQWGHDFRPEYRALVVLHERYAGVPRVALTATADDL 200

Query: 188 TRNDIVRLLELNDPLIQVSSFDRPNIRYTLVEKFKPLDQLIRFVQDQRG-----KSGIIY 242
           TR DIV  L+L +    +SSFDRPNIRY LVEK     QL RF++D+        +GI+Y
Sbjct: 201 TRADIVERLQLQEARTFISSFDRPNIRYQLVEKKDATTQLQRFIRDEHTGADGHDAGIVY 260

Query: 243 CNSRAKVEDTAARLQSRGLSVGAYHAGLDNDTRARVQEGFQRDDLQIVVATVAFGMGINK 302
           C SR +VE+ AA L   G +   YHAGLD   R R Q+ F R++  I+VAT+AFGMGI+K
Sbjct: 261 CQSRRRVEEVAAMLCEAGFNALPYHAGLDAAVRQRHQDRFLREEGLIMVATIAFGMGIDK 320

Query: 303 PNVRFVVHFDIPRTIESYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCLEEKPAGAQ-Q 361
           P+VRFV H D+P+ IE YYQETGRAGRDG PA A + Y   D+   RR ++E PA  + +
Sbjct: 321 PDVRFVAHLDMPKNIEGYYQETGRAGRDGEPANAWMAYGLQDVVNQRRMIDESPAADEFK 380

Query: 362 DVERHKLNAMNAFAEAQTCRRLVLLNYFGEGKQNACGNCDVCLDPPKRYDGLLDAQKALS 421
            V R KL+A+   AEA  CRR+ LL+YFGE  Q  CGNCD CL PP+ +D    A+K LS
Sbjct: 381 QVLRGKLDALLTLAEASDCRRVRLLSYFGEASQ-PCGNCDNCLTPPELHDATESARKLLS 439

Query: 422 VVARV----GQRFGLGYVVEVLRGSNNQRIREYGHDKLTVYGIGKEHSNEHWTSVVRQLI 477
            + RV    G  FG G+++++LRG    ++++YGH+KL+ +GIG + S   W +++RQLI
Sbjct: 440 CIYRVQQASGTAFGAGHIMDILRGKATDKVKQYGHEKLSTFGIGADLSETQWRALLRQLI 499

Query: 478 HLGLITQNIAMHSALQLTESARPVLRGEIPLQLAVPRIQTLKIKSSASQKTYGGN----- 532
               +  + A ++ L L ++AR +L+G+ P+ L     +      S  Q+          
Sbjct: 500 AREAVQVHDAPYNTLHLADAARDILKGQSPVWLKSLADKAASSARSGRQRASRATAKDDG 559

Query: 533 -----YDRKLFAKLRKLRKSLADDNNVPPYVVFNDTTLLEMAEHLPVSASDLLDITGVGQ 587
                 +R+    L+  R  +A ++N+P +V+F+D TL  +A   P + +DL  I G+GQ
Sbjct: 560 VPLSLSERECLEALKAWRAGVAREHNLPAFVIFHDATLRAIAGRKPETLADLDGIAGIGQ 619

Query: 588 RKLEKFGRPFMAMI 601
           +K E +G   + ++
Sbjct: 620 KKREAYGSDVLQVV 633