Pairwise Alignments

Query, 308 a.a., high-affinity branched-chain amino acid ABC transporter permease LivH from Rahnella sp. WP5

Subject, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

 Score =  333 bits (854), Expect = 3e-96
 Identities = 168/301 (55%), Positives = 228/301 (75%), Gaps = 1/301 (0%)

Query: 8   FIQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGID 67
           F+QQ+ NG+TLGS Y LIAIGYTMVYGIIGMINFAHGEVYMI +Y++ I +A L   G++
Sbjct: 5   FLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGVE 64

Query: 68  ASWLLIGAGFIAAIVISSAYGWSIERVAYKPVRNSKRLIALISAIGMSIFLQNYVSLTQG 127
           +  LL+    +  IV++  YG++IER+AYKP+RNS RL  LISAIG+S+ LQNY  ++QG
Sbjct: 65  SFPLLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQG 124

Query: 128 SRDLALPSLVTGQWKLGETNGFAATISTMQLIIWVVTFVAMLALTLFIRYSRMGRACRAC 187
           +R   +P+L+ G  ++   +GF     T ++ I V  FV M  LT  I+Y+++GR CRA 
Sbjct: 125 ARQQGVPTLLEGAMRVEVGSGFVQLTYT-KIFILVAAFVGMGLLTYVIKYTKLGRMCRAT 183

Query: 188 AEDLKMASLLGISTDRVISLTFVIGALMAAVAGVLLGQFYGVINPYIGFMAGMKAFTAAV 247
            +D KMAS+LGI+TDRVIS  FVIGA+MAA+AGVL+   YG  + Y GF+ G+KAFTAAV
Sbjct: 184 QQDRKMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYAGFIIGIKAFTAAV 243

Query: 248 LGGIGSIPGAMIGGLILGVAEALTSAYLSTEYKDVVSFALLIVVLLVLPTGILGRPEVEK 307
           LGGIGS+PGAM+GG+ILG++E+L S  ++++YKDV SF+LL+++L+  P G+LGRP V K
Sbjct: 244 LGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVMILIFRPQGLLGRPLVAK 303

Query: 308 V 308
           V
Sbjct: 304 V 304