Pairwise Alignments

Query, 308 a.a., high-affinity branched-chain amino acid ABC transporter permease LivH from Rahnella sp. WP5

Subject, 307 a.a., branched chain amino acid transporter - permease subunit from Pseudomonas putida KT2440

 Score =  400 bits (1028), Expect = e-116
 Identities = 203/305 (66%), Positives = 248/305 (81%)

Query: 4   QLLYFIQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMM 63
           ++ +F QQ+ NG+T+GSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYV+FI +A L M
Sbjct: 3   EIYHFFQQLVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIALAGLAM 62

Query: 64  MGIDASWLLIGAGFIAAIVISSAYGWSIERVAYKPVRNSKRLIALISAIGMSIFLQNYVS 123
           MGI +  +L+   F+A I ++SAYG+SIERVAY+P+RNS RLI LISAIGMSIFLQN V 
Sbjct: 63  MGIHSLPILMTVAFVATIFVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNTVL 122

Query: 124 LTQGSRDLALPSLVTGQWKLGETNGFAATISTMQLIIWVVTFVAMLALTLFIRYSRMGRA 183
           L+Q S+D ++P+L+ G +  G        IS MQ++++VVT VAM  LTLFI  SR+GRA
Sbjct: 123 LSQDSKDKSIPNLIPGSFSFGPGGAEEVLISYMQILVFVVTLVAMTLLTLFISRSRLGRA 182

Query: 184 CRACAEDLKMASLLGISTDRVISLTFVIGALMAAVAGVLLGQFYGVINPYIGFMAGMKAF 243
           CRACAED+KMA+LLGI+T+ +I+LTFVIGA +AAVA VLL   YGVINP  GF+ G+KAF
Sbjct: 183 CRACAEDIKMANLLGINTNNIIALTFVIGAALAAVAAVLLSMQYGVINPNAGFLVGLKAF 242

Query: 244 TAAVLGGIGSIPGAMIGGLILGVAEALTSAYLSTEYKDVVSFALLIVVLLVLPTGILGRP 303
           TAAVLGGIGSIPGAM+GGL+LGVAEA  +     +YKDVV+F LL++VLL  PTGILGRP
Sbjct: 243 TAAVLGGIGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGILGRP 302

Query: 304 EVEKV 308
           EVEKV
Sbjct: 303 EVEKV 307