Pairwise Alignments

Query, 342 a.a., DNA-binding transcriptional regulator CytR from Rahnella sp. WP5

Subject, 329 a.a., Ribose operon repressor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  208 bits (530), Expect = 1e-58
 Identities = 119/328 (36%), Positives = 191/328 (58%), Gaps = 3/328 (0%)

Query: 12  MKDVAEQAGVSTATVSRALMNPEKVSAATRQKVDQAVMAVGYSPHALARNLKRNESRTIL 71
           MKDVA  AGVST+TVS  +     VS    +KV+ A+ ++ Y+P ALAR+LK N++RTI 
Sbjct: 1   MKDVARLAGVSTSTVSHVINKDRFVSETITEKVEAAIKSLNYAPSALARSLKLNQTRTIG 60

Query: 72  VIVPDICDPFFADLIQGIERTAAESGYLVLIGDCAQQNQQEKTFINLIITKQIDGMLLLG 131
           +++    +PF+++L++G+ER+  E GY +++ +     Q+    +  ++ K++DG+LLL 
Sbjct: 61  MLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLLLLC 120

Query: 132 SDL--PFDASKEEQRNLPPMVMA-NEFAPELELPTVHIDNLTAAFEAVHYLLKLGHQRIA 188
           ++   P     E   ++P ++M  + F  E +   +  ++L     A  YL+  G  RIA
Sbjct: 121 TETHQPSREIMERYPSIPTVMMDWSPFDGEGDSDLIQDNSLLGGDLATQYLIDKGFTRIA 180

Query: 189 CIAGPKHMPLCQYRSQGYVQALRRNGLSVESKLTIHGDFSYESGAQAVTELMALPVPPTA 248
           CI GP      + R +GY  A++R GL++     I GDF +  G  A+  L+A    P A
Sbjct: 181 CITGPLDKTPARLRLEGYRAAMKRAGLAIPQGYEITGDFEFGGGFDAMQALLAHQQRPQA 240

Query: 249 IFCHNDVMAIGAMFQAKKMGLRIPQDLSVVGFDDIKASQYTDPPLTTVAQPRFQLGRQAM 308
           +F  ND MA+GA     + GLRIPQD+ V+G+DDI+ ++Y  PPLTT+ QP+ +LG  A+
Sbjct: 241 VFTGNDAMAVGAYQALYQAGLRIPQDMVVIGYDDIELARYMTPPLTTIHQPKDELGELAI 300

Query: 309 LLLLEQLQGNPVQNGSLLLDSELVVRES 336
            +L+ ++    +Q   L L   L VR S
Sbjct: 301 DVLIHRMAQPALQQQRLQLTPVLTVRGS 328