Pairwise Alignments

Query, 342 a.a., DNA-binding transcriptional regulator CytR from Rahnella sp. WP5

Subject, 341 a.a., DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) from Escherichia coli BW25113

 Score =  203 bits (517), Expect = 4e-57
 Identities = 110/332 (33%), Positives = 197/332 (59%), Gaps = 4/332 (1%)

Query: 10  ATMKDVAEQAGVSTATVSRALMNPEKVSAATRQKVDQAVMAVGYSPHALARNLKRNESRT 69
           AT+KDVA++A VST TVS  +     V+  TR  V  A+  + YSP A+AR+LK N +++
Sbjct: 2   ATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKS 61

Query: 70  ILVIVPDICDPFFADLIQGIERTAAESGYLVLIGDCAQQNQQEKTFINLIITKQIDGMLL 129
           I ++       +FA++I+ +E+   + GY +++G+     ++++ +++++  K++DG+L+
Sbjct: 62  IGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLV 121

Query: 130 LGSDLPFD--ASKEEQRNLPPMVMANEFAPELELPTVHIDN-LTAAFEAVHYLLKLGHQR 186
           + S+ P    A  EE R++P MV+ +    + +     IDN     + A  YL++ GH+ 
Sbjct: 122 MCSEYPEPLLAMLEEYRHIP-MVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHRE 180

Query: 187 IACIAGPKHMPLCQYRSQGYVQALRRNGLSVESKLTIHGDFSYESGAQAVTELMALPVPP 246
           I  I GP        R  G+++A+    + V     + GDF  ESG +A+ ++++ P  P
Sbjct: 181 IGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRP 240

Query: 247 TAIFCHNDVMAIGAMFQAKKMGLRIPQDLSVVGFDDIKASQYTDPPLTTVAQPRFQLGRQ 306
           TA+FC  D+MA+GA+  A +MGLR+PQD+S++G+D+++ ++Y  P LTT+ QP+  LG  
Sbjct: 241 TAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGET 300

Query: 307 AMLLLLEQLQGNPVQNGSLLLDSELVVRESTA 338
           A  +LL+++     +  S+ +   L+ R S A
Sbjct: 301 AFNMLLDRIVNKREEPQSIEVHPRLIERRSVA 332