Pairwise Alignments

Query, 731 a.a., primosomal protein N' from Rahnella sp. WP5

Subject, 739 a.a., primosome assembly protein from Pseudomonas putida KT2440

 Score =  682 bits (1760), Expect = 0.0
 Identities = 362/737 (49%), Positives = 477/737 (64%), Gaps = 13/737 (1%)

Query: 3   VAHVALPVPLARTFDYLLPPDMQ---VSKGCRVSVPFGKRDAIGIVTQVSDFSEFGLEKL 59
           +  +ALP PL R FDY  P  M    ++ G R+ VPFG+R+ IG++ +V   SE   +KL
Sbjct: 5   ILRLALPSPLRRLFDYKAPASMARLTLTPGMRIRVPFGRREMIGVLIEVCTQSEVPADKL 64

Query: 60  KPVREVLDSSSLFTPDLWRILFWAADYYHYPIGEVLFHALPVLLRQGKAAELTPLWQWFA 119
           KP   +LD  S     L+++  W A YY + +G+ L  ALP LLRQG+AAE+     W  
Sbjct: 65  KPASALLDPVSPIPASLFKLCLWTAQYYQHSLGDTLSWALPTLLRQGEAAEMRQERFWHI 124

Query: 120 TEEGRATPLDSLKRAPKQQQAMAALMQKP--LYRHQVADLDLTDTALQALRAKGLTDL-- 175
               R      + RAP+Q+ A+  L Q P  +    +A L+L   +L  L AK L  +  
Sbjct: 125 APGARLED-PRIARAPRQRDALKTLAQHPHGVAHSLLAKLNLNKDSLDLLLAKDLVQIET 183

Query: 176 RSIAPATHDWRQDFSVIGERLRLNTEQATAVGAIRSEDQQFSAWLLAGVTGSGKTEVYLS 235
           R   PA    R +  +    L LN EQ  A  A+      F A+LLAGVTGSGKTEVYL 
Sbjct: 184 RRHLPAL---RHEHWLAQPELPLNEEQREAFDAVCEGFGGFGAFLLAGVTGSGKTEVYLQ 240

Query: 236 VLENILAQGRQALVMVPEIGLTPQTIARFRERFSAPVDVLHSGLNDSERLAVWLRARNGE 295
           ++   L  G+QALV++PEI L PQT+ARF +RF+A + +LHS +ND ERL  WL AR+GE
Sbjct: 241 LIRETLEAGKQALVLIPEINLGPQTLARFEQRFNARIALLHSAVNDRERLDAWLAARDGE 300

Query: 296 AGIVIGTRSSLFTPFARLGVIIIDEEHDSSYKQQEGWRYHARDLAVYRAHAENIPIIMGS 355
           A I+IGTRS+LFTP    G+IIIDEEHD SYKQQEG RYHARDLA+ RAH ENIPI++GS
Sbjct: 301 ADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRAHQENIPILLGS 360

Query: 356 ATPALETLHNVELGKYRQLKLTKRAGNAKLARQNLLDLKGLQLKVGLSQPLIQKMQEHLK 415
           ATP+LETLHN   G+YR L++ +RAG A+  R   LD+K L L  G+S PL Q +++ L+
Sbjct: 361 ATPSLETLHNALTGRYRLLRMNQRAGGARPPRMLRLDVKSLPLDSGISGPLQQAIRQTLE 420

Query: 416 ADNQVMLFLNRRGYAPALLCHECGWIAECQRCDHYYTLHQNQRQLRCHHCDSQRAVPHQC 475
           A  QV++FLNRRG+AP LLCH+CGW++EC RCD   T+HQ    LRCHHC     +PHQC
Sbjct: 421 AGQQVLVFLNRRGFAPTLLCHDCGWLSECPRCDARMTVHQRSGVLRCHHCGYDERLPHQC 480

Query: 476 PHCGSTQLVSVGVGTEQLENELAPLFPDTPITRIDRDTTSRKGSLEQHLNEVHRGGARIL 535
           P C    L  VG GTE+ E  L  LFPD PI R+DRD+T+RK ++    + + RG   IL
Sbjct: 481 PQCNHVDLRPVGAGTERAEERLKVLFPDYPILRVDRDSTARKDAMHNLFSTIQRGQPSIL 540

Query: 536 IGTQMLAKGHHFPDVTLVSLLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVVL 595
           +GTQMLAKGHHFP VTLV++LD DG LFS DFR++ER AQL  QV+GRAGRA + G+V++
Sbjct: 541 VGTQMLAKGHHFPRVTLVAILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGKVII 600

Query: 596 QTHHPEHPLLQVLLQQGYDEFARQTLAERKSVFLPPYTSHIMIRSEDHDNQQSALFLQQL 655
           QTH  +HPLL  L +QGY  FA Q L ER++  LPPY+   ++R+E H   Q+  FL + 
Sbjct: 601 QTHLADHPLLVQLTEQGYFAFAEQALDERRAAGLPPYSHLALLRAEAHKPGQAEGFLDEA 660

Query: 656 RNLLES--SPLKDDSLWILGPVPALQAKRSGRFRWQLLLQHPSRRVLQHLIKSSQPLISS 713
               E   +  +   + +LGPVPA   +R+GRFR QLL+Q  +R  L  LI +   ++  
Sbjct: 661 CAAAERLVAEQRLPGIELLGPVPAPMERRAGRFRAQLLIQANTRAPLHRLISAWLLVLEQ 720

Query: 714 LPQAKKVKWTLDVDPID 730
           LP  ++V+W+LDVDP+D
Sbjct: 721 LPSGRQVRWSLDVDPVD 737