Pairwise Alignments

Query, 307 a.a., DNA-binding transcriptional regulator OxyR from Rahnella sp. WP5

Subject, 305 a.a., oxidative and nitrosative stress transcriptional regulator from Escherichia coli BL21

 Score =  538 bits (1387), Expect = e-158
 Identities = 273/307 (88%), Positives = 285/307 (92%), Gaps = 2/307 (0%)

Query: 1   MNIRDLEYLVALAEFRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA 60
           MNIRDLEYLVALAE RHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA
Sbjct: 1   MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA 60

Query: 61  GLLLVDQARTVLREVKVLKEMASQQGEAMSGPMHIGLIPTVGPYLLPQIIPSLHKTFPKL 120
           G+LLVDQARTVLREVKVLKEMASQQGE MSGP+HIGLIPTVGPYLLP IIP LH+TFPKL
Sbjct: 61  GMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKL 120

Query: 121 EMYLHEAQTHQLLAQLDSGKLDCAILALVKESEAFIEVPLFDEPMRLAIYDDHPWASRDR 180
           EMYLHEAQTHQLLAQLDSGKLDC ILALVKESEAFIEVPLFDEPM LAIY+DHPWA+R+ 
Sbjct: 121 EMYLHEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPLFDEPMLLAIYEDHPWANREC 180

Query: 181 VAMADLAGEKLLMLEDGHCLRDQALGFCFQAGADEDTHFRATSLETLRNMVAAGSGITLL 240
           V MADLAGEKLLMLEDGHCLRDQA+GFCF+AGADEDTHFRATSLETLRNMVAAGSGITLL
Sbjct: 181 VPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLL 240

Query: 241 PSLAVPNERSRDGVTYLMCDKPEPRRTIALVYRPGSPLRGRYEQLAEAIKEHMQPYMDRT 300
           P+LAVP ER RDGV YL C KPEPRRTI LVYRPGSPLR RYEQLAEAI+  M  + D+ 
Sbjct: 241 PALAVPPERKRDGVVYLPCIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIRARMDGHFDK- 299

Query: 301 AVLKQAV 307
            VLKQAV
Sbjct: 300 -VLKQAV 305