Pairwise Alignments

Query, 341 a.a., HTH-type transcriptional repressor PurR from Rahnella sp. WP5

Subject, 340 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  241 bits (615), Expect = 2e-68
 Identities = 148/342 (43%), Positives = 198/342 (57%), Gaps = 4/342 (1%)

Query: 1   MATIKDVAKRAGVSTTTVSHVINKTRFVAEETKEAVLLAIKELHYSPSAVARSLKVNNTK 60
           MATIKDVA  AG+S TTVSHV+NKTR V+E  +  V  AIK+L Y PSAVARSLK   T 
Sbjct: 1   MATIKDVAALAGISYTTVSHVVNKTRPVSEPVRIKVEAAIKQLDYVPSAVARSLKAKTTA 60

Query: 61  TIGLLATSSEAPYFAEVIEAVENSCFSKGYTLILCNSHNNLEKQQAYLQMLAQKRVDGLL 120
           TIGLL  +S  PYFAE+   +E+ C   GY +ILCNS +N EKQ+ YL++L +KR+DGL+
Sbjct: 61  TIGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDNAEKQRNYLRVLLEKRIDGLI 120

Query: 121 VMCAEYPDELLNMLEEHRSIPMVVMDWGEARKNFTDSIIDNAFEGGYMAGRYLIERGHRD 180
           V      D  L         PMV++D      +     ID+  EG Y+A R+L+E GHRD
Sbjct: 121 VTSVGGDDSGLAAGLSAVRTPMVIVDRALDGIDVDLVRIDHE-EGAYLATRHLLELGHRD 179

Query: 181 IGVIPGQLARNTGGGRFQGFVKALTEANIPLRDEWVVQGDFEPESGYQAMHKILMQKHRP 240
           I  I G         R  G+ +AL EA + +      + DF    GY A  ++L + + P
Sbjct: 180 IACIGGPAHTRVAQMRLAGYHRALREAGVTVAANRTQESDFTSTGGYTAAVQLLTE-NPP 238

Query: 241 TAVFCGGDVMAMGAICAADELGLRVPQDISVIGYDNVRNARYFSPALTTVHQPKERLGEM 300
           +A+F   D++  G + AA E  +RVP ++SVIG+D+++  RY  PALTTV Q   +LGE 
Sbjct: 239 SAIFASNDMIGFGVLRAAAERNIRVPGELSVIGFDDIQMGRYVYPALTTVGQSIVQLGET 298

Query: 301 AFTMLLDRIVSKREESQTIEVHPKLVERRSVAD--GPYRDYR 340
           A  +LL RI +         V P +V R S A   G +  YR
Sbjct: 299 AAELLLRRIATPHMPIDQRIVTPSIVLRESTAPVAGTFAQYR 340