Pairwise Alignments

Query, 341 a.a., HTH-type transcriptional repressor PurR from Rahnella sp. WP5

Subject, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

 Score =  256 bits (653), Expect = 8e-73
 Identities = 151/343 (44%), Positives = 212/343 (61%), Gaps = 6/343 (1%)

Query: 1   MATIKDVAKRAGVSTTTVSHVINKTRFVAEETKEAVLLAIKELHYSPSAVARSLKVNNTK 60
           MATIKDVA  AG+S TTVSHV+NKTR V+E+ +  V  AI EL Y PSAVARSLK  +T 
Sbjct: 1   MATIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTA 60

Query: 61  TIGLLATSSEAPYFAEVIEAVENSCFSKGYTLILCNSHNNLEKQQAYLQMLAQKRVDGLL 120
           TIGLL  +S  PYFAE+   +E++C   GY +ILCNS +N +KQ++YL++L +KR+DGL+
Sbjct: 61  TIGLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLV 120

Query: 121 VMCAEYPDELLNMLEEHRSIPMVVMDWGEARKNFTDSIIDNAFEGGYMAGRYLIERGHRD 180
           V      D+LL  L   R+ PMV++D  E      D +  +  +G Y+A R+L+E GHRD
Sbjct: 121 VASVGQDDDLLQSLASVRT-PMVIVD-RELEGVDADLVRIDHEQGAYLATRHLLELGHRD 178

Query: 181 IGVIPGQLARNTGGGRFQGFVKALTEANIPLRDEWVVQGDFEPESGYQAMHKILMQKHRP 240
           +  I G         R  GF +A+ EA  P+    V+  DF    G+ A  ++L  K RP
Sbjct: 179 VAYIGGPAETGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQVLEGK-RP 237

Query: 241 TAVFCGGDVMAMGAICAADELGLRVPQDISVIGYDNVRNARYFSPALTTVHQPKERLGEM 300
           +A+F G D++  G + AA E  + VP ++SVIG+D++  +RY  P+LTTV Q    LGE 
Sbjct: 238 SAIFAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQSIRELGES 297

Query: 301 AFTMLLDRIVSKRE-ESQTIEVHPKLVERRSVADGP--YRDYR 340
           A ++LL RI + R+  ++   V P++V R S    P  + DYR
Sbjct: 298 AASLLLTRIATPRQGAAEQRIVAPRIVLRESTGPRPDLFNDYR 340