Pairwise Alignments

Query, 341 a.a., HTH-type transcriptional repressor PurR from Rahnella sp. WP5

Subject, 330 a.a., DNA-binding transcriptional repressor of ribose metabolism (NCBI) from Escherichia coli BW25113

 Score =  293 bits (751), Expect = 3e-84
 Identities = 151/330 (45%), Positives = 218/330 (66%), Gaps = 1/330 (0%)

Query: 1   MATIKDVAKRAGVSTTTVSHVINKTRFVAEETKEAVLLAIKELHYSPSAVARSLKVNNTK 60
           MAT+KDVA+ AGVST+TVSHVINK RFV+E     V  AIKEL+Y+PSA+ARSLK+N T 
Sbjct: 1   MATMKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELNYAPSALARSLKLNQTH 60

Query: 61  TIGLLATSSEAPYFAEVIEAVENSCFSKGYTLILCNSHNNLEKQQAYLQMLAQKRVDGLL 120
           TIG+L T+S  P+++E++  VE SCF +GY+L+LCN+  + ++    L+ L QKRVDGLL
Sbjct: 61  TIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLL 120

Query: 121 VMCAEYPDELLNMLEEHRSIPMVVMDWGEARKNFTDSIIDNAFEGGYMAGRYLIERGHRD 180
           ++C E       +++ + ++P V+MDW     + +D I DN+  GG +A +YLI++GH  
Sbjct: 121 LLCTETHQPSREIMQRYPTVPTVMMDWAPFDGD-SDLIQDNSLLGGDLATQYLIDKGHTR 179

Query: 181 IGVIPGQLARNTGGGRFQGFVKALTEANIPLRDEWVVQGDFEPESGYQAMHKILMQKHRP 240
           I  I G L +     R +G+  A+  A + + D + V GDFE   G+ AM ++L    RP
Sbjct: 180 IACITGPLDKTPARLRLEGYRAAMKRAGLNIPDGYEVTGDFEFNGGFDAMRQLLSHPLRP 239

Query: 241 TAVFCGGDVMAMGAICAADELGLRVPQDISVIGYDNVRNARYFSPALTTVHQPKERLGEM 300
            AVF G D MA+G   A  +  L+VPQDI+VIGYD++  A + +P LTT+HQPK+ LGE+
Sbjct: 240 QAVFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDIELASFMTPPLTTIHQPKDELGEL 299

Query: 301 AFTMLLDRIVSKREESQTIEVHPKLVERRS 330
           A  +L+ RI     + Q +++ P L+ER S
Sbjct: 300 AIDVLIHRITQPTLQQQRLQLTPILMERGS 329