Pairwise Alignments

Query, 319 a.a., site-specific tyrosine recombinase XerD from Rahnella sp. WP5

Subject, 298 a.a., Tyrosine recombinase XerD from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  489 bits (1259), Expect = e-143
 Identities = 236/297 (79%), Positives = 265/297 (89%)

Query: 23  EADQSLTEQFLDMLWIERNLAENTLSSYRQDLKSLLGWLHHNNTDLLHVSAEDLQLFLSE 82
           E D +  EQFLD LW+ERNLAENTLS+YR+DL  ++ WLHH    L    A+DLQ  L+E
Sbjct: 2   EQDLARIEQFLDALWLERNLAENTLSAYRRDLSMVVAWLHHRGKTLATAQADDLQTLLAE 61

Query: 83  RIEGGYKATSSARLLSAMRRLFQYMNRESVRQDDPTALLSSPKLPQRLPKDLSEAQVDAL 142
           R+EGGYKATSSARLLSAMRR FQ++ RE  R+DDP+A L+SPKLPQRLPKDLSEAQV+ L
Sbjct: 62  RVEGGYKATSSARLLSAMRRFFQHLYREKYREDDPSAQLASPKLPQRLPKDLSEAQVERL 121

Query: 143 LASPSVDVPLELRDKAMLELLYATGLRVSELVGLTLSDLSLRQGVVRVIGKGNKERLVPM 202
           L +P +D PLELRDKAMLE+LYATGLRVSELVGLT+SD+SLRQGVVRVIGKGNKERLVP+
Sbjct: 122 LQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVPL 181

Query: 203 GEEAVYWIENYFEHGRPWLLNGQSLDIVFPSNRAQQMTRQTFWHRIKHYAILAGIDAERL 262
           GEEAVYW+E Y EHGRPWLLNG S+D++FPS RAQQMTRQTFWHRIKHYA+LAGID+E+L
Sbjct: 182 GEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKL 241

Query: 263 SPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLKLLHQQHHPRA 319
           SPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERL+ LHQQHHPRA
Sbjct: 242 SPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA 298