Pairwise Alignments

Query, 319 a.a., site-specific tyrosine recombinase XerD from Rahnella sp. WP5

Subject, 298 a.a., site-specific tyrosine recombinase from Escherichia coli BL21

 Score =  485 bits (1248), Expect = e-142
 Identities = 233/295 (78%), Positives = 265/295 (89%)

Query: 25  DQSLTEQFLDMLWIERNLAENTLSSYRQDLKSLLGWLHHNNTDLLHVSAEDLQLFLSERI 84
           D +  EQFLD LW+E+NLAENTL++YR+DL  ++ WLHH    L    ++DLQ  L+ER+
Sbjct: 4   DLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLAERL 63

Query: 85  EGGYKATSSARLLSAMRRLFQYMNRESVRQDDPTALLSSPKLPQRLPKDLSEAQVDALLA 144
           EGGYKATSSARLLSA+RRLFQY+ RE  R+DDP+A L+SPKLPQRLPKDLSEAQV+ LL 
Sbjct: 64  EGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVERLLQ 123

Query: 145 SPSVDVPLELRDKAMLELLYATGLRVSELVGLTLSDLSLRQGVVRVIGKGNKERLVPMGE 204
           +P +D PLELRDKAMLE+LYATGLRVSELVGLT+SD+SLRQGVVRVIGKGNKERLVP+GE
Sbjct: 124 APLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVPLGE 183

Query: 205 EAVYWIENYFEHGRPWLLNGQSLDIVFPSNRAQQMTRQTFWHRIKHYAILAGIDAERLSP 264
           EAVYW+E Y EHGRPWLLNG S+D++FPS RAQQMTRQTFWHRIKHYA+LAGID+E+LSP
Sbjct: 184 EAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLSP 243

Query: 265 HVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLKLLHQQHHPRA 319
           HVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERL+ LHQQHHPRA
Sbjct: 244 HVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA 298