Pairwise Alignments

Query, 577 a.a., single-stranded-DNA-specific exonuclease RecJ from Rahnella sp. WP5

Subject, 577 a.a., Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  869 bits (2246), Expect = 0.0
 Identities = 426/573 (74%), Positives = 497/573 (86%)

Query: 4   QTQLRRREAATGVDLPAELSPLLRRLYLARGVTQSHELERGVRGMLPYQQLDGIDTAVAL 63
           Q QLRRREA    +LPA+L PLLRRLY +RGV  + ELER V+GMLP+QQL GID AV +
Sbjct: 4   QRQLRRREADETAELPADLPPLLRRLYASRGVRSARELERSVKGMLPWQQLSGIDNAVEI 63

Query: 64  LQKALAERLRIIIVGDFDADGATSTALTLLSLRSMGCGNLDYLVPNRFEDGYGLSPEVVE 123
           L  A  E  RII+VGDFDADGATSTAL++L +R++GC N+ YLVPNRFEDGYGLSPEVV+
Sbjct: 64  LYNAFREGTRIIVVGDFDADGATSTALSVLGMRALGCDNISYLVPNRFEDGYGLSPEVVD 123

Query: 124 QAASRGAELILTVDNGISSHAGVTLAHEKGIQVLITDHHLPGEILPDAEAIINPNLVGCE 183
           QA +RGA+LI+TVDNGISSHAGV  A   GI V++TDHHLPG+ LPDAEAIINPNL  CE
Sbjct: 124 QAKARGAQLIVTVDNGISSHAGVAHAKTLGIPVIVTDHHLPGDTLPDAEAIINPNLRDCE 183

Query: 184 FPSKSLAGVGVAFYLMLALRSALRESGWFEQNGLAIPNLAEHLDLVALGTVADVVPLDTN 243
           FPSKSLAGVGVAFYLMLALR+ LR+ GWF++  +A PNLAE LDLVALGTVADVVPLD N
Sbjct: 184 FPSKSLAGVGVAFYLMLALRTFLRDKGWFDERNIAPPNLAELLDLVALGTVADVVPLDAN 243

Query: 244 NRIMVYQGLNRIRAGKCRAGIRALLEVAGREARTLCASDLGFALGPRLNAAGRLDDMSVG 303
           NRI+ +QGL+RIRAGKCR GI+ALLE++ R+ + L ASDLGFALGPRLNAAGRLDDMSVG
Sbjct: 244 NRILTWQGLSRIRAGKCRPGIKALLEISNRDPQQLAASDLGFALGPRLNAAGRLDDMSVG 303

Query: 304 VALLLSEDIGQARALASDLDALNQTRREIEQGMQVEALALCDKLESSTDALPFGLAMYHP 363
           VALLL +++G+AR LAS+LDALNQTR+EIEQGMQ EAL LC+KLE S++ LP GLAMYHP
Sbjct: 304 VALLLCDNLGEARVLASELDALNQTRKEIEQGMQAEALILCEKLERSSETLPGGLAMYHP 363

Query: 364 EWHQGVVGILASRLKERFNRPVIAFAPAGEGILKGSGRSIAGLHMRDALERLDTLNPGLM 423
           EWHQGVVGILASR+KERF+RPVIAFAPAG+G LKGSGRSI GLHMRDALERLDTL P LM
Sbjct: 364 EWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYPDLM 423

Query: 424 MKFGGHAMAAGLSLEESKFDEFRDRFAALVGEWLDPSHLEGVVWSDGELSARELTIDTAE 483
           +KFGGHAMAAGLSLEE KF++F+ RF  LV EWLDP+ L+G V SDG LSA E++++ A+
Sbjct: 424 IKFGGHAMAAGLSLEEHKFEQFQQRFGELVTEWLDPALLQGEVISDGPLSAAEMSMEVAQ 483

Query: 484 MLRDGGPWGQAFPEPTFDGRFRILQQKLLKERHLKLMIEPVGGGPLLDGIAFNIDPTFWP 543
           +LRD GPWGQ FPEP FDGRFR+LQQ+L+ ERHLK+M+EPVGGGPLLDGIAFNID T WP
Sbjct: 484 LLRDAGPWGQMFPEPLFDGRFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNIDTTCWP 543

Query: 544 DSSIREVQLAYRLDINEFRGNRSVQLIIEHLWP 576
           D+ +REV+LAY+LDINEFRGNRS+Q+II+ +WP
Sbjct: 544 DNGVREVELAYKLDINEFRGNRSLQIIIDDIWP 576