Pairwise Alignments

Query, 510 a.a., PTS transporter subunit EIIC from Rahnella sp. WP5

Subject, 453 a.a., PTS system, IIB component (EC 2.7.1.69) / PTS system, IIC component (EC 2.7.1.69) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  153 bits (387), Expect = 1e-41
 Identities = 131/497 (26%), Positives = 219/497 (44%), Gaps = 66/497 (13%)

Query: 6   AQTAQDIVKYIGGDNNVISITHCATRLRFVLKDNKAVDKEELKRVKGVITVIEAGGQMQV 65
           A  A DI++ IGG+ N++ + +C TR+R  ++D+  +D   LK + GV   ++ G Q Q+
Sbjct: 5   AALASDILRGIGGEQNILRLENCMTRVRVEVQDDSQLDIPRLKALPGVSGYVKQGEQHQL 64

Query: 66  VIGN----HVSDAY-----------NQVLKLIQIDENAPVSAPNVGIVSRVMDVISSIFT 110
           ++G      V DA            +  +   + +  A   AP    +S  +  ++++F 
Sbjct: 65  IVGPGKAAQVVDAMRVQIAAGGVKPDDAMARTKSEAKAKYKAP----MSDALRKLANVFI 120

Query: 111 PFLYQLAACGILQGIISFLAAIGIMDASSGTYRILNFVSWTAFTFLPVMIAFTAAKKFNV 170
           P +    A G++ GII+ L    I+   +  Y  L          L +M  F +A  F +
Sbjct: 121 PLIPAFIASGLITGIINILKRPDIVGDVAVHYPNL----------LGLMGIFGSAV-FAI 169

Query: 171 NPFTAVITACALISPDYMNMLTAFKITSINSADPAMQQLMREAVSNPDIANILQNVVGIP 230
                            MN+L       +     A+  +M   +S+P +A I   + G  
Sbjct: 170 -----------------MNILVGVNTAKVFGGSQALGGVMAGILSSPQLAQI--TLFG-E 209

Query: 231 VSAPTLDFLGIPVKYLSYTASVIPIILMVWAMSYIEHFFNKVLPVVIRNLFTPMFCIAIM 290
           V  P                 VI ++L+V  M +IE  F K+LP  +  +  P+    I 
Sbjct: 210 VLQPG-------------RGGVIAVLLVVALMCWIERQFRKLLPGSLELILNPLLTTVIT 256

Query: 291 VPMTLLVFGPVGNLIGGAIGGVYNYLYHLSPTIAGFVVGAFWQPLVTLGVHWGITPVTVG 350
             + ++   P+G  I  AI    ++       + G V+   + PLV  G+H G+ P+ V 
Sbjct: 257 GAVAIVALQPLGGWISDAIAHGASWAIDRGGFLVGAVLAGTFLPLVLTGLHQGLVPIHVE 316

Query: 351 NYATLGYDTFTGLQASAVFAMTGSMFGVYLKTRSREMKGISLSAGVTGLFGITEPAIYGV 410
                GY+    + A A     G+   V +KTR+  +K +   A   GL GI EP I+GV
Sbjct: 317 LVQAHGYNALFPILAMAGVGQIGAAIAVLMKTRNARLKKVIKGALPVGLLGIGEPLIFGV 376

Query: 411 ALRLKKPFLCSCVAGGIGGAIAGSFNAVSWSYCLPGIAVLPVFFKEGHMPQFLGFLLSIS 470
            L L KPF+ +C+ G +GGA+   +     +    GI+ LP+        + L +LL   
Sbjct: 377 TLPLGKPFIGACLGGAVGGALISYWKVA--TVITFGISGLPLALTI-VAGKVLFYLLGYL 433

Query: 471 VAFVLGALFTWLVGFKD 487
           +A + G +FTWL+GF D
Sbjct: 434 IAVIAGFIFTWLLGFND 450