Pairwise Alignments

Query, 510 a.a., PTS transporter subunit EIIC from Rahnella sp. WP5

Subject, 473 a.a., trehalose-specific PTS enzyme: IIB and IIC component from Escherichia coli BL21

 Score =  146 bits (369), Expect = 1e-39
 Identities = 117/443 (26%), Positives = 195/443 (44%), Gaps = 62/443 (13%)

Query: 12  IVKYIGGDNNVISITHCATRLRFVLK---DNKAVDKEELKRVKGVITVIEAGGQMQVVIG 68
           +++ +GG  N+ +++HC TRLRFVL    + +  + E+L  VKG  T     GQ QVVIG
Sbjct: 13  LIELVGGRGNIATVSHCITRLRFVLNQPANARPKEIEQLPMVKGCFT---NAGQFQVVIG 69

Query: 69  NHVSDAYNQVLKLI---QIDENAPVSAP--NVGIVSRVMDVISSIFTPFLYQLAACGILQ 123
            +V D Y  ++      Q+D+     A   N+    +++   + IF P L  L + G++ 
Sbjct: 70  TNVGDYYQALIASTGQAQVDKEQVKKAARQNMKWHEQLISHFAEIFFPLLPALISGGLIL 129

Query: 124 GIISFLAAIGIMDASSGT------------YRILNFVSWTAFTFLPVMIAFTAAKKFNVN 171
           G   F   IG +  S+G             Y  L  +    F +LPV I ++A KK    
Sbjct: 130 G---FRNVIGDLPMSNGQTLAQMYPSLQTIYDFLWLIGEAIFFYLPVGICWSAVKKMGGT 186

Query: 172 PFTAVITACALISPDYMNMLTAFKITSINSADPAMQQLMREAVSNPDIANILQNVVGIPV 231
           P   ++    L+SP  MN            A    QQL       P++            
Sbjct: 187 PILGIVLGVTLVSPQLMN------------AYLLGQQL-------PEV------------ 215

Query: 232 SAPTLDFLGIPVKYLSYTASVIPIILMVWAMSYIEHFFNKVLPVVIRNLFTPMFCIAIMV 291
                DF    +  + Y A VIP +L   A+  IE    +++P  +  +  P+  + + V
Sbjct: 216 ----WDFGMFSIAKVGYQAQVIPALLAGLALGVIETRLKRIVPDYLYLVVVPVCSLILAV 271

Query: 292 PMTLLVFGPVGNLIGGAIGGVYNYLYHLS-PTIAGFVVGAFWQPLVTLGVHWGITPVTVG 350
            +   + GP G +IG  +     +L   S   I   + G  + PLV  GVH     + + 
Sbjct: 272 FLAHALIGPFGRMIGDGVAFAVRHLMTGSFAPIGAALFGFLYAPLVITGVHQTTLAIDLQ 331

Query: 351 NYATLGYDTFTGLQASAVFAMTGSMFGVYLKTRSREMKGISLSAGVTGLFGITEPAIYGV 410
              ++G      L A +  A   ++ G+ + +R    + IS+ A ++   G+TEPA+YG+
Sbjct: 332 MIQSMGGTPVWPLIALSNIAQGSAVIGIIISSRKHNEREISVPAAISAWLGVTEPAMYGI 391

Query: 411 ALRLKKPFLCSCVAGGIGGAIAG 433
            L+ + P LC+ +  G+ G + G
Sbjct: 392 NLKYRFPMLCAMIGSGLAGLLCG 414