Pairwise Alignments

Query, 510 a.a., PTS transporter subunit EIIC from Rahnella sp. WP5

Subject, 485 a.a., cellobiose/arbutin/salicin-specific PTS enzymes, IIB and IC components from Escherichia coli BL21

 Score =  257 bits (657), Expect = 6e-73
 Identities = 158/510 (30%), Positives = 259/510 (50%), Gaps = 47/510 (9%)

Query: 1   MAINYAQTAQDIVKYIGGDNNVISITHCATRLRFVLKDNKAVDKEELKRVKGVITVIEAG 60
           MA NYA  A+ ++  +GG +N+ ++THC TRLRFV+KD+  +D   LK + GV+ V+ + 
Sbjct: 1   MAKNYAALARSVIAALGGVDNISAVTHCMTRLRFVIKDDALIDSPTLKTISGVLGVVRSD 60

Query: 61  GQMQVVIGNHVSDAYNQVLKLIQIDENA--PVSAPNVG---IVSRVMDVISSIFTPFLYQ 115
            Q QV+IGN VS A+ +V+ L+  D     PV  P +    I + ++D +    +P +  
Sbjct: 61  NQCQVIIGNTVSQAFQEVVSLLPGDMQPALPVGKPKLTLRRIGAGILDALIGTMSPLIPA 120

Query: 116 LAACGILQGIISFLAAIGIMDASSGTYRILNFVSWTAFTFLPVMIAFTAAKKFNVNPFTA 175
           +    +++ +   L   G++   S T  ILN +   AF FLP+M+A +AA KF  N   A
Sbjct: 121 IIGGSMVKLLAMILEMSGVLTKGSPTLTILNVIGDGAFFFLPLMVAASAAIKFKTNMSLA 180

Query: 176 VITACALISPDYMNMLTAFKITSINSADPAMQQLMREAVSNPDIANILQNVVGIPVSAPT 235
           +  A  L+ P ++                   +LM +A     +                
Sbjct: 181 IAIAGVLVHPSFI-------------------ELMAKAAQGEHV---------------- 205

Query: 236 LDFLGIPVKYLSYTASVIPIILMVWAMSYIEHFFNKVLPVVIRNLFTPMFCIAIMVPMTL 295
            +F  IPV  + YT +VIP ++M W +SYIE + + + P V +N   PM  + I  P+ +
Sbjct: 206 -EFALIPVTAVKYTYTVIPALVMTWCLSYIERWVDSITPAVTKNFLKPMLIVLIAAPLAI 264

Query: 296 LVFGPVGNLIGGAIGGVYNYLYHLSPTIAGFVVGAFWQPLVTLGVHWGITPVTVGNYATL 355
           L+ GP+G  IG AI  +   ++     ++  ++GA W  LV  G+H   TP  +   A  
Sbjct: 265 LLIGPIGIWIGSAISALVYTIHGYLGWLSVAIMGALWPLLVMTGMHRVFTPTIIQTIAET 324

Query: 356 GYDTFT-GLQASAVFAMTGSMFGVYLKTRSREMKGISLSAGVTGLF-GITEPAIYGVALR 413
           G +      +  A  ++ GS   V  KT++ E++  +L+A  + +  GI+EPA+YGVA+R
Sbjct: 325 GKEGMVMPSEIGANLSLGGSSLAVAWKTKNPELRQTALAAAASAIMAGISEPALYGVAIR 384

Query: 414 LKKPFLCSCVAGGIGGAIAGSFNAVSWSYCLPGIAVLPVFFKEGHMPQFLGFLLSISVAF 473
           LK+P + S ++G I GA+AG     S S   PG+     FF   +    +     +++A 
Sbjct: 385 LKRPLIASLISGFICGAVAGMAGLASHSMAAPGLFTSVQFFDPANPMSIVWVFAVMALAV 444

Query: 474 VLGALFTWLVGFKDEPDVAAPQKVPAETRR 503
           VL  + T L+GF+D P     ++  AE R+
Sbjct: 445 VLSFILTLLLGFEDIP----VEEAAAEARK 470