Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Rahnella sp. WP5

Subject, 330 a.a., transcriptional repressor of ribose metabolism from Escherichia coli BL21

 Score =  145 bits (366), Expect = 1e-39
 Identities = 101/317 (31%), Positives = 159/317 (50%), Gaps = 17/317 (5%)

Query: 4   TIYDIARLAKVSKSTVSRVITNQTNISPDARERVLDAIRTLNYQPSKLARALTSKGFDAI 63
           T+ D+ARLA VS STVS VI     +S     +V  AI+ LNY PS LAR+L       I
Sbjct: 3   TMKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELNYAPSALARSLKLNQTHTI 62

Query: 64  LVISTRSTKTTAGNPFFSEILQSIALRAEEEGFDVILQTSKNSEEDLQKCVAKITEKMVK 123
            ++ T ST     NPF+SE+++ +     E G  ++L  ++  E+ + + +  + +K V 
Sbjct: 63  GMLITAST-----NPFYSELVRGVERSCFERGDSLVLCNTEGDEQRMNRNLETLMQKRVD 117

Query: 124 GVIMLSSPADEYILEQLDNYQ-VPVVVIGNIEGTYQHVFSVDTDNFQDSYRL-----TEH 177
           G+++L +   +   E +  Y  VP V++          F  D+D  QD+  L     T++
Sbjct: 118 GLLLLCTETHQPSREIMQRYPTVPTVMMDWAP------FDGDSDLIQDNSLLGGDLATQY 171

Query: 178 LISLGHQDIACLHAPLDYHVSIDRLAGYKRAMQDAGLPAQPGLMVDGGYTTESAYLAATT 237
           LI  GH  IAC+  PLD   +  RL GY+ AM+ AGL    G  V G +     + A   
Sbjct: 172 LIDKGHTRIACITGPLDKTPARLRLEGYRAAMKRAGLNIPDGYEVTGDFEFNGGFDAMRQ 231

Query: 238 LLQKAHPPTAVFATDAVKVMSIYRAAHEQKKIIPDEMSITGYSSDNISPILSPGLTGIEI 297
           LL     P AVF  +    + +Y+A ++ +  +P ++++ GY    ++  ++P LT I  
Sbjct: 232 LLSHPLRPQAVFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDIELASFMTPPLTTIHQ 291

Query: 298 PIRELGWQGCGVLFDKI 314
           P  ELG     VL  +I
Sbjct: 292 PKDELGELAIDVLIHRI 308