Pairwise Alignments

Query, 281 a.a., carbohydrate ABC transporter permease from Rahnella sp. WP5

Subject, 276 a.a., carbohydrate ABC transporter permease from Rhizobium sp. OAE497

 Score =  165 bits (418), Expect = 9e-46
 Identities = 93/276 (33%), Positives = 145/276 (52%), Gaps = 2/276 (0%)

Query: 6   RKILRKAGFYASLLIFLGAMLFPFFIMLMTSFKSSKEAISRHPTLFPQEWDFHHYVDIFN 65
           R ++       ++L ++   LFP F +L  S   +    S    ++P    + HY  +  
Sbjct: 3   RSVIPTIAHRLAILCYILFALFPLFWLLKVSVTPNDLLYSEGVRMWPSRTTWEHYSFVLQ 62

Query: 66  PQIFPFLSYFKNSLTVSVLASVIAVFFGILGAYALSRLRFKGRVTINASFYTVYMFSGIL 125
              FP  ++FKNSL VS   ++       L  YALSR  F+ +  I A      MF  ++
Sbjct: 63  HSAFP--TFFKNSLIVSASTAITVTICASLSGYALSRFNFRAKYWIVALMLLTQMFPLVM 120

Query: 126 LVVPLFKIISALGLYDTTTALVITMVVQTLPTAVFMLKSYFDTIPHDIEEAAMMDGLNRL 185
           LV P+FKI++ L L ++ T LVI      +P A F+++S+FD IP D+EEAAM+DG  + 
Sbjct: 121 LVAPIFKILTPLHLTNSLTGLVIVYTAFNVPFATFLMQSFFDGIPKDLEEAAMIDGATQF 180

Query: 186 QIIFYITVPLAISGIISVFVYCFMVAWNDYLFASIFLSSSANFTLPVGLNTLFSTPDYVW 245
                I +PL + GI +   + F  AW++ LFA + ++ +   T PVGL T  S     +
Sbjct: 181 TAFRQIILPLTLPGIAATLGFVFTAAWSELLFALMLINGNDAATFPVGLLTFVSKFSVDF 240

Query: 246 GRMMAASLVTALPVVLMYALSERFIKGNLTDGGVKG 281
           G+MMAA ++  +P  L + L +R++   LT G VKG
Sbjct: 241 GQMMAAGVMALIPAGLFFLLIQRYLVQGLTAGAVKG 276