Pairwise Alignments

Query, 281 a.a., carbohydrate ABC transporter permease from Rahnella sp. WP5

Subject, 277 a.a., trehalose/maltose ABC transporter permease from Agrobacterium fabrum C58

 Score =  158 bits (399), Expect = 1e-43
 Identities = 91/276 (32%), Positives = 157/276 (56%), Gaps = 6/276 (2%)

Query: 8   ILRKAGFYASLLIFLGAMLFPFFIMLMTSFKSSKEAISRHPTLFPQEWDFHHYVDIFNPQ 67
           IL+   FYA + I +   +FPF+  ++TS KS       +   +P+++   +Y  +    
Sbjct: 6   ILKTTAFYALVAIIMVISVFPFYYAILTSLKSGSALFQVN--YWPRDFSLTNYSFVIGNG 63

Query: 68  IFPFLSYFKNSLTVSVLASVIAVFFGILGAYALSRLRFKGRVTINASFYTVYMFSGILLV 127
            F  L    NSL V+    V+++F  +  +YAL+R+RF+GR  +  +  +V MF  I ++
Sbjct: 64  TF--LRNLGNSLLVASSVVVLSLFLAVTASYALARVRFRGRSLLLLTILSVSMFPQIAVL 121

Query: 128 VPLFKIISALGLYDTTTALVITMVVQTLPTAVFMLKSYFDTIPHDIEEAAMMDGLNRLQI 187
             LF++I   G+++T  AL+ + ++ TLP  V++L ++   +P +IEEAA++DG     I
Sbjct: 122 AGLFELIRWAGIFNTPLALIFSYMIFTLPFTVWVLTTFMRDLPIEIEEAAIVDGATPWVI 181

Query: 188 IFYITVPLAISGIISVFVYCFMVAWNDYLFASIFLSSSANFTLPVGLNTLF--STPDYVW 245
           I  + +PL    +++  +  F+ AWN++LFA  F SS+   T+PV +  L   S  +  W
Sbjct: 182 ITQVFMPLMWPALVTTGLLAFIAAWNEFLFALTFTSSNEQRTVPVAIALLSGGSQFEIPW 241

Query: 246 GRMMAASLVTALPVVLMYALSERFIKGNLTDGGVKG 281
           G +MAAS++   P+V++  + +R I   LT GGVKG
Sbjct: 242 GTIMAASVIVTAPLVVLVLIFQRRIISGLTAGGVKG 277