Pairwise Alignments

Query, 325 a.a., calcium/sodium antiporter from Rahnella sp. WP5

Subject, 348 a.a., conjugal transfer protein TraR from Pseudomonas simiae WCS417

 Score =  184 bits (466), Expect = 4e-51
 Identities = 119/307 (38%), Positives = 185/307 (60%), Gaps = 11/307 (3%)

Query: 8   MIVGLLLLVYAADRLVYGAAVLARSMGISPLVIGMTVVGVGISLPELVVSTTAAINDQMD 67
           M+ GL+LL+  A+ LV  A  LA S+ + PL+IG+T+V  G S P++ VS  A +    D
Sbjct: 1   MVSGLVLLIIGAEILVRAAVRLAASLKVRPLIIGLTIVAFGSSAPQMTVSLQATLAGNTD 60

Query: 68  LAVGNAIGSNIINILLILGGAALIHPLSVRSDILRRELPLLLLVTALCGFLLSDGELSRF 127
           +AVG+ IGS+I NIL+ LG +ALI PL V   ++R ++P+++L   L   L ++  L+  
Sbjct: 61  IAVGSVIGSSIFNILVTLGLSALIIPLRVSRQLVRLDIPVMILAGLLVFTLAANEALTPL 120

Query: 128 DGVLLLASAGVFMMLMIKIARAAEKEGLDTLTYEQMSELPQDSSNTVAFLWLALGFIIMP 187
           DG++LL +   ++ ++    R + +      T + ++  P  SS     L +  G +I+ 
Sbjct: 121 DGLVLLVALVAYLGVLHYQTRHSRR----PRTLDTVARAPWLSS----VLLMLGGLLILV 172

Query: 188 LASGMIVDNSTVIARYLGVSELVIGLTVIAIGTSLPELATFIAGAIKGEDDIALGNIIGA 247
           LA  +++  +  +A  LG+SE VIGLT+I +GTSLP LAT +  A++GE +IA+GN+IG+
Sbjct: 173 LAGHLLLGAAVDVAGDLGLSERVIGLTLIGVGTSLPCLATSLIAALRGEREIAVGNVIGS 232

Query: 248 NIFNTCLVLGLPALVAPG--SFNPDAFHRDYWVMLAVSVVLSGLCLMRKHRIGHLAGALL 305
           N+FN   VLGL AL+AP   S +P+A   D  VML V VVL        +R+    G +L
Sbjct: 233 NLFNLLGVLGLTALLAPSPLSVSPNALDFDLPVMLGV-VVLCLPVFYTGYRVTRAEGLVL 291

Query: 306 LCGFIAY 312
           L  ++AY
Sbjct: 292 LGLYLAY 298



 Score = 96.3 bits (238), Expect = 1e-24
 Identities = 58/135 (42%), Positives = 88/135 (65%), Gaps = 3/135 (2%)

Query: 2   LLAIVLMIVGLLLLVYAADRLVYGAAVLARSMGISPLVIGMTVVGVGISLPELVVSTTAA 61
           L +++LM+ GLL+LV A   L+  A  +A  +G+S  VIG+T++GVG SLP L  S  AA
Sbjct: 158 LSSVLLMLGGLLILVLAGHLLLGAAVDVAGDLGLSERVIGLTLIGVGTSLPCLATSLIAA 217

Query: 62  INDQMDLAVGNAIGSNIINILLILGGAALI--HPLSVRSDILRRELPLLLLVTALCGFLL 119
           +  + ++AVGN IGSN+ N+L +LG  AL+   PLSV  + L  +LP++L V  LC  + 
Sbjct: 218 LRGEREIAVGNVIGSNLFNLLGVLGLTALLAPSPLSVSPNALDFDLPVMLGVVVLCLPVF 277

Query: 120 SDG-ELSRFDGVLLL 133
             G  ++R +G++LL
Sbjct: 278 YTGYRVTRAEGLVLL 292