Pairwise Alignments

Query, 335 a.a., Holliday junction branch migration DNA helicase RuvB from Rahnella sp. WP5

Subject, 348 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Pseudomonas putida KT2440

 Score =  496 bits (1276), Expect = e-145
 Identities = 246/330 (74%), Positives = 287/330 (86%)

Query: 1   MIEADRLISSEVFSEEEVIDRAIRPKLLSEYVGQPHVRSQMEIFIQAAKQRKDALDHLLI 60
           MIEADRLI++     EEV DRAIRP  L EY+GQP VR QM +FIQAA+ R ++LDH LI
Sbjct: 1   MIEADRLIAASGRDREEVQDRAIRPLSLDEYIGQPVVREQMALFIQAARGRGESLDHTLI 60

Query: 61  FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP 120
           FGPPGLGKTTLANI+A+EMGV++++TSGP+LE+ GDLAAMLTNLEPHDVLFIDEIHRLSP
Sbjct: 61  FGPPGLGKTTLANIIAHEMGVSVKSTSGPILERPGDLAAMLTNLEPHDVLFIDEIHRLSP 120

Query: 121 VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRDRFGIVQR 180
           VVEE+LYPAMED+QLDIMIGEGPAARSIKLDLPPFTL+GATTRAG LT+PLRDRFGIVQR
Sbjct: 121 VVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQR 180

Query: 181 LEFYQVADLQHIVGRSASCLGLELSEEGAHQIARRSRGTPRIANRLLRRVRDFAEVKGDG 240
           LEFY   DL  IV RSA+ LGL + ++GA++IARR+RGTPRIANRLLRRVRD+AEV+G G
Sbjct: 181 LEFYNDKDLSTIVSRSANILGLAIEDQGAYEIARRARGTPRIANRLLRRVRDYAEVRGKG 240

Query: 241 TINGDVANGALDMLDVDAEGFDYMDRKLLLAIIDKFSGGPVGLDNLAAAIGEERETIEDV 300
            I   VA+ AL++LDVD  GFD+ DR+LLL +I+KF GGPVG+DNLAAAI EER TIEDV
Sbjct: 241 QITKAVADMALNLLDVDERGFDHSDRRLLLTMIEKFDGGPVGVDNLAAAISEERHTIEDV 300

Query: 301 IEPFLIQQGFIQRTPRGRMATNHAYKHFGI 330
           +EP+LIQQG+I RTPRGR+ T HAY HFG+
Sbjct: 301 LEPYLIQQGYIMRTPRGRVVTRHAYLHFGL 330