Pairwise Alignments

Query, 335 a.a., Holliday junction branch migration DNA helicase RuvB from Rahnella sp. WP5

Subject, 345 a.a., Holliday junction DNA helicase, RuvB subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  377 bits (968), Expect = e-109
 Identities = 187/311 (60%), Positives = 239/311 (76%)

Query: 20  DRAIRPKLLSEYVGQPHVRSQMEIFIQAAKQRKDALDHLLIFGPPGLGKTTLANIVANEM 79
           ++A+RP    ++ GQ  +   +++F+ AAK+R ++LDH+L+ GPPGLGKTTL++I+ANE+
Sbjct: 21  EKALRPLSFDDFTGQQKIVDNIQVFVMAAKKRGESLDHVLLHGPPGLGKTTLSHIIANEL 80

Query: 80  GVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSPVVEEILYPAMEDYQLDIMI 139
             +L+ TSGPVL+K  DLA +LTNLE  DVLFIDEIHRL+ VVEE LY AMED+++DIM+
Sbjct: 81  ESSLKITSGPVLDKPSDLAGLLTNLEEGDVLFIDEIHRLNAVVEEYLYSAMEDFRIDIML 140

Query: 140 GEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEFYQVADLQHIVGRSASC 199
             GP ARS+++ L PFTLIGATTR+G LTSPLR RFGI  RLE+Y    L  IV RSA+ 
Sbjct: 141 DSGPNARSVQISLNPFTLIGATTRSGLLTSPLRARFGINARLEYYDAKLLTTIVTRSANI 200

Query: 200 LGLELSEEGAHQIARRSRGTPRIANRLLRRVRDFAEVKGDGTINGDVANGALDMLDVDAE 259
           LG  + E  A++IARRSRGTPRIAN LLRR RDFA++KG+GTI  D+A  ALD LDVD  
Sbjct: 201 LGAPIDEVAAYEIARRSRGTPRIANTLLRRTRDFADIKGNGTITLDIAKVALDALDVDEN 260

Query: 260 GFDYMDRKLLLAIIDKFSGGPVGLDNLAAAIGEERETIEDVIEPFLIQQGFIQRTPRGRM 319
           G D MD ++L  II+KF GGPVG+  +A A GEE ETIE+V EPFLIQ+G+++RT RGR+
Sbjct: 261 GLDEMDNRILTTIIEKFKGGPVGISTIATACGEEGETIEEVYEPFLIQEGYLKRTSRGRI 320

Query: 320 ATNHAYKHFGI 330
           AT  AYKH  I
Sbjct: 321 ATELAYKHLNI 331