Pairwise Alignments

Query, 565 a.a., long-chain-fatty-acid--CoA ligase FadD from Rahnella sp. WP5

Subject, 562 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  610 bits (1572), Expect = e-179
 Identities = 307/554 (55%), Positives = 410/554 (74%), Gaps = 6/554 (1%)

Query: 5   WLKRYPADVPENIDPDRYSSLVEMFENATLRYADNAAFINMGEVMTYRKLEERSRAFAAY 64
           WL  YPA VP +ID  +Y SLV + E +  ++A   A+  MG+ +++ + +  S+AFAAY
Sbjct: 10  WLGAYPAGVPADIDVAQYPSLVHLMEESFQKHAGRTAYSFMGKDVSFAQTDSLSQAFAAY 69

Query: 65  LQNELGLRKGDRVALMMPNLLQYPIALFGVLRAGMVVVNVNPLYTPRELEHQLNDSGASA 124
           LQ  LGL KGDRVA+MMPN+ QYP+A+ G+LRAG VVVNVNPLYTPRELEHQL DSGA A
Sbjct: 70  LQG-LGLVKGDRVAIMMPNVPQYPVAVAGILRAGFVVVNVNPLYTPRELEHQLKDSGAKA 128

Query: 125 IVIVSNFAHTLEKVVYKTQVKHVILTRMGDQLSAAKGTLVNFVVKYIKRLVPKYHLPNAI 184
           IVI+ NFAHTL++ +  T  KHV+L  MGDQL   KG LVN+VV+ +K++VP Y LP A+
Sbjct: 129 IVIIENFAHTLQQCIANTPTKHVVLAAMGDQLGLLKGALVNYVVRNVKKMVPAYSLPQAV 188

Query: 185 SFRTALQRGRRLQYIKPDIINNDLAFLQYTGGTTGVAKGAMLTHRNMQANLEQAKAAYAP 244
            F  A+ +G R    +P+I  +D+A LQYTGGTTGV+KGA+L HRN+ AN+ Q++A   P
Sbjct: 189 RFNDAIAKGTRGTLKRPEIKPDDMAVLQYTGGTTGVSKGAVLQHRNVIANVLQSEAWNDP 248

Query: 245 LLQ--PGHE--LVVTALPLYHIFALTVNCLLFLELGGKSLLITNPRDVPGMVKELGKYPF 300
           +++  P  E    V ALPLYHIFA TVN +L +  GGK++LI NPRD+P ++KEL K+ F
Sbjct: 249 VMKKVPAGEQPTSVCALPLYHIFAFTVNMMLAMRTGGKTILIPNPRDLPAVLKELSKHTF 308

Query: 301 TAISGVNTLFNALLNNEDFRELDFSSLRLSVGGGMSVQKSVAEKWEKLTGKHLLEGYGLT 360
            +   VNTLFN L N+ DF  +++S+L++SVGGGM+VQ +VA+ W + TG  + EGYGL+
Sbjct: 309 HSFPAVNTLFNGLANHPDFNTVNWSNLKVSVGGGMAVQSAVAKLWLEKTGCPICEGYGLS 368

Query: 361 ECSPLVSGNPYDLKHYSGSIGLPVPSTEVRLVDDNGKDVGPGQPGELWVKGPQVMLGYWQ 420
           E SP  S NP     YSG+IG+P+P+T ++ +DD+G +V  GQPGE+ +KGPQVM GYWQ
Sbjct: 369 ETSPSASCNPTTSTEYSGTIGVPLPNTFMKCLDDDGNEVPMGQPGEIAIKGPQVMAGYWQ 428

Query: 421 RPSATDEVL-KDGWLSTGDIVTVDEQGFLRIVDRKKDMILVSGFNVYPNEIEEVVSQHDK 479
           RP  T +V+  DG+  +GD+  +D +G+ +IVDRKKDM+LVSGFNVYPNE+E+VV+    
Sbjct: 429 RPDETAKVMTADGFFKSGDVGVMDARGYFKIVDRKKDMVLVSGFNVYPNEVEDVVALLPG 488

Query: 480 VLEVAAIGVPDESSGEIVKICVVKKDPSLTSEELLAHCRRLLTGYKVPKIVEFRDELPKS 539
           V+E A +GVPDE SGE VK+ +VKKD SLT  ++  +C+  LTGYK PK+VEFR ELPK+
Sbjct: 489 VMECAVVGVPDEKSGEAVKLVIVKKDESLTEAQVREYCKTNLTGYKQPKVVEFRTELPKT 548

Query: 540 NVGKILRRELRDEQ 553
            VGKILRRELRD++
Sbjct: 549 PVGKILRRELRDKK 562