Pairwise Alignments

Query, 526 a.a., ABC transporter substrate-binding protein from Rahnella sp. WP5

Subject, 535 a.a., dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor from Escherichia coli BL21

 Score =  187 bits (474), Expect = 1e-51
 Identities = 142/521 (27%), Positives = 239/521 (45%), Gaps = 29/521 (5%)

Query: 18  AGAIFLALSGLSFATQAAVPKDMLVIGKAADPQTLDPAVTIDNNDWTVT-YPAYQRLVQY 76
           +G + L LS ++    A+V    LV      P+  +P +      +  +  P Y RLV++
Sbjct: 8   SGMLKLGLSLVAMTVAASVQAKTLVYCSEGSPEGFNPQLFTSGTTYDASSVPLYNRLVEF 67

Query: 77  KTEDGKGSTQVEGDLAASWTASPDQLVWTFKLKPGAKFDDGSD------VNADAVKWSFE 130
           K     G+T+V   LA  W  S D   +TF L+ G K+ D  +      +NAD V +SF+
Sbjct: 68  KI----GTTEVIPGLAEKWEVSEDGKTYTFHLRKGVKWHDNKEFKPTRELNADDVVFSFD 123

Query: 131 RLM-------KIGQGPSEAF-----PKDMT-VTVVDPMTVTFTLKTPFAPFLYTLANDGA 177
           R         K+  G  E F     P+ ++ V  VD  TV F L  P APFL  LA D A
Sbjct: 124 RQKNAQNPYHKVSGGSYEYFEGMGLPELISEVKKVDDNTVQFVLTRPEAPFLADLAMDFA 183

Query: 178 GIVNPAIAKANPADEGKAWLAGHTAGSGPYKLDRWQKGQQLVLVPNPHYSGTKPAFKRVT 237
            I++   A A         L  +  G+GP++L ++QK  ++       Y GTKP    + 
Sbjct: 184 SILSKEYADAMMKAGTPEKLDLNPIGTGPFQLQQYQKDSRIRYKAFDGYWGTKPQIDTLV 243

Query: 238 VKIIGESATRRLQLSRGDLDIADSLPMDQLAALKKENKVAVEEFPSLRVTYLYLNNGKTP 297
             I  +++ R  +L + +  +        +A +K++  + + E P L V YL  N  K P
Sbjct: 244 FSITPDASVRYAKLQKNECQVMPYPNPADIARMKQDKSINLMEMPGLNVGYLSYNVQKKP 303

Query: 298 LNQVDLRRAISSAVDYQGMVKGILGGNAKQMRGPIPDGMWGFDPTAKQYTLDLTQAKADL 357
           L+ V +R+A++ AV+   ++K +  G     +  IP  MWG++   + YT D  +AKA L
Sbjct: 304 LDDVKVRQALTYAVNKDAIIKAVYQGAGVSAKNLIPPTMWGYNDDVQDYTYDPEKAKALL 363

Query: 358 EKV-KDKPQTLDF----LYSDNDPNWESIALSVQASLGQAGINVKLEKLANATMRDRIGQ 412
           ++   +K  ++D     +    +PN   +A  +QA   + G+  K+          R   
Sbjct: 364 KEAGLEKGFSIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVQAKIVTYEWGEYLKRAKD 423

Query: 413 GDYDISIGNWSPDFADPYMFMNYWFESDKKGLPGNRSFYSNPDVDALLKKAVSVTDQKQR 472
           G++   +  W+ D  DP  F    F         N S +     + L++ A +  D  +R
Sbjct: 424 GEHQTVMMGWTGDNGDPDNFFATLFSCAASEQGSNYSKWCYKPFEDLIQPARATDDHNKR 483

Query: 473 TDYYQQAQKIVIDEAAYVYLFQKNYQVAMNKDVKGFVFNPM 513
            + Y+QAQ ++ D+A  + +        + K+VKG+V +P+
Sbjct: 484 VELYKQAQVVMHDQAPALIIAHSTVFEPVRKEVKGYVVDPL 524