Pairwise Alignments

Query, 279 a.a., diaminopimelate epimerase from Rahnella sp. WP5

Subject, 274 a.a., diaminopimelate epimerase from Escherichia coli BL21

 Score =  167 bits (422), Expect = 3e-46
 Identities = 105/266 (39%), Positives = 150/266 (56%), Gaps = 9/266 (3%)

Query: 1   MIFHRYHGLGNDYLVCHHRVA-ALLSNQQIRRICDRHYGIGSDGLLIDNDDADIPSL--- 56
           M F + HGLGND++V          S + IRR+ DRH G+G D LL+     D P L   
Sbjct: 1   MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYD-PELDFH 59

Query: 57  -RIINPDGSEAEKSGNGLRIYARYLFDIGRVAHEPFLVNTPGGQVRCEVTDGAHQVIVDM 115
            RI N DGSE  + GNG R +AR++   G        V+T  G++   VTD    V V+M
Sbjct: 60  YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDD-DLVRVNM 118

Query: 116 GQAKFSPAALPASVEGDEALALPIVAGGHNLSATLVSMGNPHCVIRVDKLDLDLVKQLGS 175
           G+  F P+A+P      E   + + A    +   +VSMGNPHCVI+VD +D   V+ LG 
Sbjct: 119 GEPNFEPSAVPFRANKAEKTYI-MRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGP 177

Query: 176 EIETLAIFPKRTNVQFAQVLDRKNISIGIWERGAGYTLASGSSSCAAASAMRKLGLVDDH 235
            +E+   FP+R N+ F QV+ R++I + ++ERGAG T A GS +CAA +   + GL+ + 
Sbjct: 178 VLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEE 237

Query: 236 VTVHMPGGKLAISFSG-DFQVNMRGP 260
           V V +PGG+L I++ G    + M GP
Sbjct: 238 VRVELPGGRLDIAWKGPGHPLYMTGP 263