Pairwise Alignments

Query, 395 a.a., XylR family transcriptional regulator from Rahnella sp. WP5

Subject, 391 a.a., Xylose operon regulatory protein from Pseudomonas sp. RS175

 Score =  354 bits (908), Expect = e-102
 Identities = 178/380 (46%), Positives = 253/380 (66%), Gaps = 1/380 (0%)

Query: 6   YRITLLFNANKVYDRQVVEGVGEYLQASQSDWDIFIEEDFRCRIDNIKDWLGDGVIADFD 65
           +RI LLFN +K+YDR ++ G+G YL ++++ WD+F+EEDF CR+  I+ W GDG+IADFD
Sbjct: 8   HRIALLFNGSKIYDRGIISGIGNYLSSTRASWDLFLEEDFLCRLKGIERWQGDGIIADFD 67

Query: 66  DREIETLLEGLNVPIVGVGGSYHQEEDYPP-VHYIATDNYALVEAAFMHLKEKGINRFAF 124
           D  I   L G+ +P+V VGGSY  E  YP  + Y+ATDN+AL++ A+ HL E G+ RFA 
Sbjct: 68  DPLIGEALAGIRLPVVAVGGSYEDERAYPKGIPYVATDNFALMKLAYEHLIEAGLTRFAC 127

Query: 125 YGLPDAGGKRWAQEREHAFRKLVSAEQYQGVVYQGMETAPENWQHAQNRLADWIQTLPQQ 184
           + LP A   RWAQERE AFR L+  +     VY+GM T+   W  A  +   W+Q+LP+ 
Sbjct: 128 FSLPVAQANRWAQERERAFRSLLQRDGLHVEVYRGMGTSAPLWDSAVEQQIAWLQSLPKP 187

Query: 185 TGIIAVTDARARHLLQVCEHLNIPVPEKLSVIGIDNEELTRYLSRVALSSVVQGTRQMGY 244
            GIIAV+DARAR LLQ C    I VPE++++IGIDN+ LTR L+RV LSSV+QGT  MG 
Sbjct: 188 IGIIAVSDARARQLLQACLTAGIAVPEQVALIGIDNDPLTRSLTRVPLSSVIQGTETMGR 247

Query: 245 RAAKLLHQLLDQRDLPLQRILVPPVKVVERRSTDFRSLRDPAVIQAMHYIRYHACKGIKV 304
            AA+LLHQ+L        ++L+PP  +  + S+  + L +P V+QA+ +IR +AC+GIK 
Sbjct: 248 TAARLLHQMLHGMPSTGTQVLIPPDAINVQASSLHQPLGNPYVMQALLFIRQYACQGIKT 307

Query: 305 EQVLDAIGMSRSNLEKRFKDETGQTIHGVIHEEKLDRARNLLAATSISINEISQMCGYPS 364
            QV   +G+SRS+LE  F+   G ++H  I   KL  A + L  T   I +I++ CG+ S
Sbjct: 308 AQVAAYVGVSRSSLEAHFRKVRGCSVHDEILRFKLAAAASGLEKTDSPIADIARQCGFKS 367

Query: 365 LQYFYSVFKKGYEMTPKEYR 384
            QY ++VF++ +  TP+EY+
Sbjct: 368 AQYLHTVFRREFGCTPREYQ 387