Pairwise Alignments

Query, 307 a.a., LysR family transcriptional regulator from Rahnella sp. WP5

Subject, 299 a.a., DNA-binding transcriptional dual regulator (NCBI) from Escherichia coli BW25113

 Score =  100 bits (248), Expect = 5e-26
 Identities = 64/245 (26%), Positives = 117/245 (47%), Gaps = 7/245 (2%)

Query: 1   MQSTEIRYFLVVANTGSLSAASKQLFVAVSAISRQIQRLEERIGAPLFERHARGMVLNDA 60
           M S  I YFL VA  GS + A+  L V+  A+S+QI++LEE +G PLF+R  R + L DA
Sbjct: 1   MLSRHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDA 60

Query: 61  GQILENHVRKSMMDMEHAIAEIQGLNAVRRTVIRMACTDGLAFDLLPQLFSQFRLNNPGV 120
           G++   +  +++ ++      I  +  + R  +R+A T       +  L + F    P +
Sbjct: 61  GEVWRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSI 120

Query: 121 MFYLNVGTAVEVSEMIHNGEVELALQFSLVAERGVDILASFPAPVRMVMRPDHPLA-ESE 179
              L   +  ++ +M+   E+++ + F+ V    ++ +      + +V+   HPLA   +
Sbjct: 121 TLQLQEMSQEKIEDMLCRDELDVGIAFAPVHSPELEAIPLLTESLALVVAQHHPLAVHEQ 180

Query: 180 VQLTDLHPYPLAMNEQGSTIRQLFDLSCRMSGIFLEPAVSCNRFSTLYDFMVQT------ 233
           V L+ LH   L +       R+  D  C  +G+  +  +  N  S + + + +T      
Sbjct: 181 VALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLL 240

Query: 234 PGAIA 238
           P AIA
Sbjct: 241 PAAIA 245