Pairwise Alignments

Query, 369 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotF from Rahnella sp. WP5

Subject, 370 a.a., putrescine transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score =  633 bits (1633), Expect = 0.0
 Identities = 308/370 (83%), Positives = 342/370 (92%), Gaps = 1/370 (0%)

Query: 1   MFTLRKKWLSGVVAGLVMAASV-TASADEKTLHIYNWSDYIAPNTVPDFQKETGIKVVYD 59
           M  L KKWLSG+VAG +MA SV T +A++KTLHIYNWSDYIAP+TV +F+KETGIKVVYD
Sbjct: 1   MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIAPDTVANFEKETGIKVVYD 60

Query: 60  VFDSNEVLEGKLMAGSTGFDLVVPSASFLERQLAAGVFQPLDKSKLPNYKNMDPELLKMV 119
           VFDSNEVLEGKLMAGSTGFDLVVPSASFLERQL AGVFQPLDKSKLP +KN+DPELLK+V
Sbjct: 61  VFDSNEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLV 120

Query: 120 AQHDPGNKYAIPYLWATTGIGYNVDKVKAVLGKDAPVDSWDLVLKPENLEKLKSCGVSFL 179
           A+HDP NK+A+PY+WATTGIGYNVDKVKAVLG++APVDSWDL+LKPENLEKLKSCGVSFL
Sbjct: 121 AKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFL 180

Query: 180 DAPAEIYATVLNYLHLDPNSTKASDYTGAANDLLLKLRPNIRYFHSSQYINDLANGDICV 239
           DAP E++ATVLNYL  DPNSTKA DYTG A DLLLKLRPNIRYFHSSQYINDLANGDICV
Sbjct: 181 DAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICV 240

Query: 240 AIGWAGDVMQAGNRAKEAKNGVNVAYSIPKEGALAFFDVFAIPADAKNLDEAYQFLNYLM 299
           AIGWAGDV QA NRAKEAKNGVNV++SIPKEGA+AFFDVFA+PADAKN DEAYQFLNYL+
Sbjct: 241 AIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKDEAYQFLNYLL 300

Query: 300 EPKVIAQISNTVYYASGNKAATPLVNEDVRNNPGIYPPADVQAKLFTLKVQDPKIDRVIT 359
            P V+A IS+ V+YA+ NKAATPLV+ +VR NPGIYPPADV+AKLFTLKVQDPKIDRV T
Sbjct: 301 RPDVVAHISDHVFYANANKAATPLVSAEVRENPGIYPPADVRAKLFTLKVQDPKIDRVRT 360

Query: 360 RSWTKVKTGK 369
           R+WTKVK+GK
Sbjct: 361 RAWTKVKSGK 370