Pairwise Alignments

Query, 376 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Rahnella sp. WP5

Subject, 376 a.a., 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  577 bits (1487), Expect = e-169
 Identities = 285/375 (76%), Positives = 317/375 (84%), Gaps = 1/375 (0%)

Query: 1   MHCALYTAGTCRSCQWLDKPYLQQLADKQRDLSDLLSDLPVDEWCEPVTGPESAFRNKAK 60
           M CALY AG CRSCQW+ +   +QL+ K  DL  LL+ LPV++WC P+ GPE  FRNKAK
Sbjct: 1   MQCALYDAGRCRSCQWITQSVNEQLSAKTADLHRLLAGLPVEQWCAPIGGPEQHFRNKAK 60

Query: 61  MVVSGSVERPLLGMLHRDGTPVDLCECPLYPASFPAVFSVLKIFIARAGLTPYNVARKRG 120
           MVVSGSVE+PL GMLHRDGTPVDLC CPLYPASF  VFS LK FIARAGLTPYNVARKRG
Sbjct: 61  MVVSGSVEKPLFGMLHRDGTPVDLCGCPLYPASFDPVFSALKPFIARAGLTPYNVARKRG 120

Query: 121 ELKFLLLTESQKDGGMMLRFVLRSDAKLAQLRAALPWLQQQLPQLKVISANIQPVHMAIL 180
           ELK+LLLTESQ DGGMMLRFVLRS+ KL QLRAALPWL+ QLPQL+VI+ANIQPVHMAI+
Sbjct: 121 ELKYLLLTESQFDGGMMLRFVLRSETKLTQLRAALPWLRAQLPQLRVITANIQPVHMAIM 180

Query: 181 EGDTEIPLTDVQRLEEDFNHVPLFIRPQSFFQTNPVVAEKLYATARDWVRARGDIRSMWD 240
           EG+TEI LTD Q L E FN VPL+IRPQSFFQTNP VA +LYATARDWV  +  +R MWD
Sbjct: 181 EGETEIYLTDQQALAERFNDVPLWIRPQSFFQTNPTVASRLYATARDWV-GQLPVRHMWD 239

Query: 241 LFCGVGGFGLHCATPQMKLTGIEISAEAIACAKESAVRLGLQNVEFQALDSTGFATGKGE 300
           LFCGVGGFGLHCATPQM+LTGIEI+ EAIACAK+SA  LGL  + FQALDST FAT +GE
Sbjct: 240 LFCGVGGFGLHCATPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGE 299

Query: 301 VPDLVLVNPPRRGIGKALCEYLSHMAPDRILYSSCNAQTMAQDLALLPDYHILRVRLFDM 360
            PDLVLVNPPRRGIGK LC+YL+ MAP  I+YSSCNAQTMAQD+  LP+Y I RV+LFDM
Sbjct: 300 TPDLVLVNPPRRGIGKPLCDYLAQMAPRFIIYSSCNAQTMAQDIRHLPNYRIQRVQLFDM 359

Query: 361 FPHTAHYEVMALLVR 375
           FPHTAHYEV+ALL R
Sbjct: 360 FPHTAHYEVLALLRR 374