Pairwise Alignments

Query, 376 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Rahnella sp. WP5

Subject, 375 a.a., 23S rRNA m(5)U747 methyltransferase, SAM-dependent from Escherichia coli BL21

 Score =  584 bits (1506), Expect = e-171
 Identities = 284/376 (75%), Positives = 323/376 (85%), Gaps = 1/376 (0%)

Query: 1   MHCALYTAGTCRSCQWLDKPYLQQLADKQRDLSDLLSDLPVDEWCEPVTGPESAFRNKAK 60
           M CALY AG CRSCQW+ +P  +QL+ K  DL +LL+D PV+EWC PV+GPE  FRNKAK
Sbjct: 1   MQCALYDAGRCRSCQWITQPIPEQLSAKTADLKNLLADFPVEEWCAPVSGPEQGFRNKAK 60

Query: 61  MVVSGSVERPLLGMLHRDGTPVDLCECPLYPASFPAVFSVLKIFIARAGLTPYNVARKRG 120
           MVVSGSVE+PLLGMLHRDGTP DLC+CPLYPASF  VFS LK FIARAGLTPYNVARKRG
Sbjct: 61  MVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAPVFSALKPFIARAGLTPYNVARKRG 120

Query: 121 ELKFLLLTESQKDGGMMLRFVLRSDAKLAQLRAALPWLQQQLPQLKVISANIQPVHMAIL 180
           ELK++LLTESQ DGGMMLRFVLRS+ KLAQLR ALPWLQ+QLPQLKVI+ NIQPVHMAI+
Sbjct: 121 ELKYILLTESQSDGGMMLRFVLRSETKLAQLRKALPWLQEQLPQLKVITVNIQPVHMAIM 180

Query: 181 EGDTEIPLTDVQRLEEDFNHVPLFIRPQSFFQTNPVVAEKLYATARDWVRARGDIRSMWD 240
           EG+TEI LT+ Q L E FN VPL++RPQSFFQTNP VA +LYATARDWVR +  ++ MWD
Sbjct: 181 EGETEIYLTEQQALAERFNDVPLWVRPQSFFQTNPAVASQLYATARDWVR-QLPVKHMWD 239

Query: 241 LFCGVGGFGLHCATPQMKLTGIEISAEAIACAKESAVRLGLQNVEFQALDSTGFATGKGE 300
           LFCGVGGFGLHCATP M+LTGIEI+ EAIACAK+SA  LGL  ++FQALDST FAT +GE
Sbjct: 240 LFCGVGGFGLHCATPDMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGE 299

Query: 301 VPDLVLVNPPRRGIGKALCEYLSHMAPDRILYSSCNAQTMAQDLALLPDYHILRVRLFDM 360
           VP+LVLVNPPRRGIGK LC+YLS MAP  I+YSSCNAQTMA+D+  LP Y I RV+LFDM
Sbjct: 300 VPELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSCNAQTMAKDVRELPGYRIERVQLFDM 359

Query: 361 FPHTAHYEVMALLVRR 376
           FPHTAHYEV+ LLV++
Sbjct: 360 FPHTAHYEVLTLLVKQ 375