Pairwise Alignments

Query, 340 a.a., flagellar motor switch protein FliM from Rahnella sp. WP5

Subject, 335 a.a., flagellar motor switch protein FliM from Erwinia tracheiphila SCR3

 Score =  540 bits (1390), Expect = e-158
 Identities = 264/340 (77%), Positives = 301/340 (88%), Gaps = 5/340 (1%)

Query: 1   MGDSILSQAEIDALLNGDSDSDNASNTAAAAKTAASDDGVKPFDPTTQRRVVRERLQALE 60
           MGDSILSQAEIDALLNGDSDS +  N + +      D+ ++P+DP TQRR+VRERLQALE
Sbjct: 1   MGDSILSQAEIDALLNGDSDSASEENVSKSG-----DNDIRPYDPNTQRRMVRERLQALE 55

Query: 61  IINERFARHFRMGLFNLLRRSPDITVGAIKIQPYHDFARNLPVPTNLNLIHLKPLRGTAL 120
           IINERFAR +RM LFNLLRRSPDITVGAIKIQPYH+FARNLPVPTNLNLIHLKPLRGTAL
Sbjct: 56  IINERFARSYRMALFNLLRRSPDITVGAIKIQPYHEFARNLPVPTNLNLIHLKPLRGTAL 115

Query: 121 FVFAPSLVFIAVDNLFGGDGRFPTKVEGREFTHTEQRVIKRMLRLALDAYEDAWSGVYKL 180
            VF+PSLVFIAVDNLFGGDGRFPTKVEGREFT TEQRVI+RML+LA++ Y +AW  +Y L
Sbjct: 116 VVFSPSLVFIAVDNLFGGDGRFPTKVEGREFTATEQRVIRRMLKLAIEGYSEAWKPIYPL 175

Query: 181 SVEYVRAELQIKFTNITSSPNDIVVTTPFHVEIGALSGDFNICIPFSMIEPLRELLTNPP 240
            VEYVR+E+Q+KFTNIT+SPNDIV+TTPF VEIG L G+FNICIPFSMIEPLRE L NPP
Sbjct: 176 DVEYVRSEMQVKFTNITTSPNDIVITTPFQVEIGNLLGEFNICIPFSMIEPLRETLVNPP 235

Query: 241 VENSRNEESQWRENLVHQVQQSELELVANFVEIPLRLSQILKLKPGDVLPIEKPDRLIAH 300
           +ENSR E++ WRE L  QVQ SELEL+ANF ++ +R+S++L LKPGDVLPIEKP+R+IAH
Sbjct: 236 LENSRQEDNYWRETLAKQVQHSELELIANFADVSMRISRLLALKPGDVLPIEKPERIIAH 295

Query: 301 VDGVPVLTSQYGTLNEQYALRVEHLINPILNSLDEEQPHE 340
           VDGVPVLTSQYGTLN QYALRVEHLINPILNS++EEQP E
Sbjct: 296 VDGVPVLTSQYGTLNGQYALRVEHLINPILNSMNEEQPDE 335