Pairwise Alignments

Query, 340 a.a., flagellar motor switch protein FliM from Rahnella sp. WP5

Subject, 338 a.a., flagellar motor switch protein FliM from Dickeya dadantii 3937

 Score =  561 bits (1446), Expect = e-165
 Identities = 274/338 (81%), Positives = 313/338 (92%), Gaps = 3/338 (0%)

Query: 1   MGDSILSQAEIDALLNGDSDSDNASNTAAAAKTAASDDGVKPFDPTTQRRVVRERLQALE 60
           MGDSILSQAEIDALLNGDS SDN+++ + AA  +  D  VKP+DP TQRRV+RERLQALE
Sbjct: 1   MGDSILSQAEIDALLNGDS-SDNSADASNAA--SQKDGDVKPYDPNTQRRVIRERLQALE 57

Query: 61  IINERFARHFRMGLFNLLRRSPDITVGAIKIQPYHDFARNLPVPTNLNLIHLKPLRGTAL 120
           IINERFAR FRMGLFNLLRRSPDITVGAIKIQPYH+FARNLPVPTNLNLIHLKPLRGTAL
Sbjct: 58  IINERFARQFRMGLFNLLRRSPDITVGAIKIQPYHEFARNLPVPTNLNLIHLKPLRGTAL 117

Query: 121 FVFAPSLVFIAVDNLFGGDGRFPTKVEGREFTHTEQRVIKRMLRLALDAYEDAWSGVYKL 180
           FVF+PSLVFIAVDNLFGGDGRFPTKVEGREFTHTEQRV++RML+LAL++Y DAW+ +YKL
Sbjct: 118 FVFSPSLVFIAVDNLFGGDGRFPTKVEGREFTHTEQRVVRRMLKLALESYSDAWNAIYKL 177

Query: 181 SVEYVRAELQIKFTNITSSPNDIVVTTPFHVEIGALSGDFNICIPFSMIEPLRELLTNPP 240
            VEYVR+E+Q+KFTNIT+SPNDIVVTTPFH+EIG L+G+F+ICIPFSMIEPLRELL NPP
Sbjct: 178 DVEYVRSEMQVKFTNITTSPNDIVVTTPFHLEIGTLTGEFSICIPFSMIEPLRELLANPP 237

Query: 241 VENSRNEESQWRENLVHQVQQSELELVANFVEIPLRLSQILKLKPGDVLPIEKPDRLIAH 300
           +ENS+ E+  WRE L  QVQ SELELVANFV+IP+RLS++LKLKPGD+LPI+KP+RL+AH
Sbjct: 238 LENSQQEDQHWRETLAKQVQHSELELVANFVDIPVRLSKVLKLKPGDILPIDKPERLVAH 297

Query: 301 VDGVPVLTSQYGTLNEQYALRVEHLINPILNSLDEEQP 338
           VDGVPVLT QYGTL+ QYALRVEHLINPILNSL++E+P
Sbjct: 298 VDGVPVLTCQYGTLDGQYALRVEHLINPILNSLNDEEP 335