Pairwise Alignments

Query, 340 a.a., ABC transporter ATP-binding protein from Rahnella sp. WP5

Subject, 337 a.a., oligopeptide ABC transporter ATPase from Escherichia coli BL21

 Score =  295 bits (755), Expect = 1e-84
 Identities = 155/320 (48%), Positives = 213/320 (66%), Gaps = 6/320 (1%)

Query: 11  LLHINDLRVQFS--GSPATVLDGISLQLEAGKTLALVGESGCGKSVTSLALMGLLPASAK 68
           LL++ DLRV FS      T ++ ++  L AG+TL +VGESG GKS T+ ALMGLL A+ +
Sbjct: 19  LLNVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGR 78

Query: 69  VLQGDIRLNDTSLLGLSERQYADLRGQELAMIFQEPMTSLNPALTLGDQLAEAVMRHQGV 128
           +  G    N   +L L E +   LR ++++MIFQ+PMTSLNP + +G+QL E +M H+ +
Sbjct: 79  I-GGSATFNGREILNLPEHELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNM 137

Query: 129 GKKPAREQALEILKKVQIPAPELRMEAYPHQLSGGMRQRVMIAMALINRPQLLIADEPTT 188
            K  A E+++ +L  V++P    RM+ YPH+ SGGMRQRVMIAMAL+ RP+LLIADEPTT
Sbjct: 138 SKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTT 197

Query: 189 ALDVTIQAQILALLNRIQQETGSALLLITHDLGVVAEVADSVAVMYAGQIVEQGLVTDIF 248
           ALDVT+QAQI+ LLN +++E  +A+++ITHDLGVVA + D V VMYAG+ +E G   D+F
Sbjct: 198 ALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNARDVF 257

Query: 249 NNPQHPYTIGLMGSMPSLAPRQGALSTIPGAVPLPKDMPQGCRFSTRCPFATERCHQERP 308
             P HPY+IGL+ ++P L      + TIPG  P    +P+GC F  RCP A E C    P
Sbjct: 258 YQPVHPYSIGLLNAVPRLDAEGETMLTIPGNPPNLLRLPKGCPFQPRCPHAMEIC-SSAP 316

Query: 309 PLRALNQSPHHVACFFAPLE 328
           PL     +P  +   F P+E
Sbjct: 317 PLEEF--TPGRLRACFKPVE 334