Pairwise Alignments

Query, 420 a.a., ABC transporter substrate-binding protein from Rahnella sp. WP5

Subject, 401 a.a., putative Sulfonate ABC transporter, periplasmic sulfonate-binding protein from Pseudomonas putida KT2440

 Score = 72.4 bits (176), Expect = 2e-17
 Identities = 72/295 (24%), Positives = 130/295 (44%), Gaps = 37/295 (12%)

Query: 13  SRRRFIAGSAVL--GGSMMMPGFMNSVWAAGSDAPEKKEIRVGFIPLTDCSSVVMAAVKK 70
           SRR F+   A+L   G++ +   + +  AA  DAP    +R+G++P+TD + +++A    
Sbjct: 11  SRRDFLKLGAMLTAAGALPLLSSLQARAAAEPDAP----VRIGYLPITDATPLLVAHNNG 66

Query: 71  FDEKYGIKII-PSKESSWASVRDKLVSGELDAAHVLYGLVYGLQLGVSGPQHDMAMLMSL 129
             E  GIK   P    SWA V +  +SG+++  H+L  +    + G   P   +A     
Sbjct: 67  LFEAEGIKAERPVLLRSWAQVIEAFISGQVNVIHLLSPMTVWARYGSKVPAKVVAW---- 122

Query: 130 NNNGQAITLSNQLKQAGVTDAASLKKMVDASAKGTYTFAQTFPTGTHAMWLYYWLANAGI 189
                     N +  +G+T A  +  +     K   T A  F    H + L   L + G+
Sbjct: 123 ----------NHVGGSGLTVAPDISAVKQLGGK---TVAIPFWYSIHNVVLQQLLNDNGL 169

Query: 190 HPF----------NDVRNVVVPPPQMVVNMKIGNMSGYCVGEPWNQRAIQDDIGFTAATS 239
            P           N+V  +V+PP  M   +    ++GY V EP+N  A    +G     +
Sbjct: 170 TPVSKPANAQLAANEVNLLVLPPSDMPPALASKRIAGYIVAEPFNALAENLKVGRVQRFT 229

Query: 240 QEIWPDHPEKILGTTSAWVAANPNAARALTAAVLDASRWIDTSDANRIETAQVVA 294
            ++W +H   ++      +   P  ++ +  A++ A +W  T D +R E A +++
Sbjct: 230 GDVWRNHACCVVFMHEHDLNNRPEWSQKVVNAIVKAQQW--TRD-HRTEAAALLS 281