Pairwise Alignments

Query, 420 a.a., ABC transporter substrate-binding protein from Rahnella sp. WP5

Subject, 404 a.a., putative Nitrate-binding protein NasS from Pseudomonas putida KT2440

 Score =  434 bits (1116), Expect = e-126
 Identities = 207/382 (54%), Positives = 275/382 (71%), Gaps = 3/382 (0%)

Query: 38  WAAGSDAPEKKEIRVGFIPLTDCSSVVMAAVKKFDEKYGIKIIPSKESSWASVRDKLVSG 97
           W  GSDAPEK  + +G++ LTDC+SVV+AA + F +++G+ +   ++ SWA +RDKLVSG
Sbjct: 12  WVNGSDAPEKTSLNIGYMALTDCASVVVAATQGFAQQHGLTLNLQRQGSWAGLRDKLVSG 71

Query: 98  ELDAAHVLYGLVYGLQLGVSG-PQHDMAMLMSLNNNGQAITLSNQLKQAGVTDAASLKKM 156
           ELDAAH LYGLVY + LG+ G P  DMA+LM LN N QAI LS  L++ GVT+  +L ++
Sbjct: 72  ELDAAHCLYGLVYAVHLGIGGVPASDMAVLMGLNQNAQAINLSPALQRKGVTNPEALARL 131

Query: 157 VDASAKGTYTFAQTFPTGTHAMWLYYWLANAGIHPFNDVRNVVVPPPQMVVNMKIGNMSG 216
           V        TFAQTFPTGTHAMWLYYWLA+ GIHP  DV +VVVPP QM  +++ G + G
Sbjct: 132 VHQHG-ARLTFAQTFPTGTHAMWLYYWLASQGIHPLRDVDSVVVPPAQMAAHLQAGRIDG 190

Query: 217 YCVGEPWNQRAIQDDIGFTAATSQEIWPDHPEKILGTTSAWVAANPNAARALTAAVLDAS 276
           +CVGEPW   A+    GFT ATSQ IWPDHPEK+L     +    PN+ARAL  A+L AS
Sbjct: 191 FCVGEPWAADAVAKGQGFTLATSQSIWPDHPEKVLACARVFAEQYPNSARALIKAILTAS 250

Query: 277 RWIDTSDANRIETAQVVAARAYINTPVATIQGRMLGDYENGLGKKWKDAHSMRFFNDGAV 336
           R+I+ S  NR  TAQ+++A AY++TP+ +I  R+LG YE+GLG +W+D H++R F+ G  
Sbjct: 251 RFIEQSPENRRSTAQLLSASAYLDTPLDSIAPRLLGHYEDGLGNQWQDPHALRLFDQGRA 310

Query: 337 NYPYLSDGMWFLTQHKRWGLLDKDPDYLAVAKKINRIDVYKQAATAVGGINLPSGDMRSS 396
           N PYLSDGMWF+TQ +RWGLL +DPDYL VA+++ ++ +Y +AA ++ GI  P   MRSS
Sbjct: 311 NLPYLSDGMWFMTQFRRWGLLREDPDYLGVARQVQQLQLYSEAAQSL-GIACPGQPMRSS 369

Query: 397 TLMDGKVWDGSNPAEYANSFAM 418
            L+DG  WDGS+P  YA SF++
Sbjct: 370 LLIDGSRWDGSDPFGYARSFSL 391