Pairwise Alignments

Query, 420 a.a., ABC transporter substrate-binding protein from Rahnella sp. WP5

Subject, 463 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  210 bits (534), Expect = 8e-59
 Identities = 135/413 (32%), Positives = 202/413 (48%), Gaps = 43/413 (10%)

Query: 44  APEKKEIRVGFIPLTDCSSVVMAAVKKFDEKYGIKIIPSKESSWASVRDKLVSGELDAAH 103
           A EK ++  GFI LTD + + +A    F E  G+ +    +S+W +V D+++ G+LD +H
Sbjct: 48  AIEKPQLTFGFIKLTDMAPLAIAKEMGFFEDEGLYVTIEAQSNWKNVLDRVIDGQLDGSH 107

Query: 104 VLYGLVYGLQLGVSGPQHDMAMLMSLNNNGQAITLSNQL---------------KQAGVT 148
           +L G       G  G Q ++    S++ NG  IT+SN++                Q  + 
Sbjct: 108 MLAGQPIAAGAGF-GRQAELVTPFSMDLNGNGITVSNEVWSAMEPNIPKDADGRPQHPIK 166

Query: 149 DAASLKKMVDASAKGT-YTFAQTFPTGTHAMWLYYWLANAGIHPF------------NDV 195
             A    + D    G  +     FP  TH   + YWLA AGI+P              DV
Sbjct: 167 ADALAPVIQDYKTSGRPFKMGMVFPVSTHNYEIRYWLAAAGINPGFYTADNSQGQVDADV 226

Query: 196 RNVVVPPPQMVVNMKIGNMSGYCVGEPWNQRAIQDDIGFTAATSQEIWPDHPEKILGTTS 255
              V PPPQM   ++ G + GYCVGEPWNQ+A+   IG    T+ +IW ++PEK+   + 
Sbjct: 227 LLSVTPPPQMPATLEAGTIYGYCVGEPWNQQAVFKGIGVPVTTNYDIWKNNPEKVFVMSK 286

Query: 256 AWVAANPNAARALTAAVLDASRWIDTSDANRIETAQVVAARAYINTPVATIQGRMLGDYE 315
            +V  NPN A A+T A++ A +W+DT   NR E   +++   Y+      I   M G +E
Sbjct: 287 KFVDENPNTAIAVTKALIRAGKWLDT-PGNRPEAVGILSRPEYVGADSVVIANSMTGTFE 345

Query: 316 NGLGKKWKDAHSMRFFNDGAVNYPYLSDGMWFLTQHKRWGLLDKDPD---YLAVAKKINR 372
              G K        FF   A  YPY SDG+WFLTQ +RWG + +      Y    K I R
Sbjct: 346 FEKGDKRSMPDFNVFFRHHA-TYPYYSDGIWFLTQMRRWGQIPESKSEEWYHETIKDIYR 404

Query: 373 IDVYKQAA-TAVGGINLPSGDM--------RSSTLMDGKVWDGSNPAEYANSF 416
            D++++AA   +   NL + D+         +   +DG ++DG +P +Y NSF
Sbjct: 405 PDIWEKAAEMLLAERNLDAEDIPETDGYKPATDEFIDGTMYDGKDPIQYINSF 457